Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3102 ATGGACCCCAAATTCAGGCGCGTCGGTTTCGAACCCGACCCGAACCAATCCCAATATCCGCTTACTGTGCCCCCGCCACGTCTTCTCTCCGAGAGAACCGCCGCCGTTCCTGTTCCGGAGATAGGGTTCCGGCGTCAGTTCCCGGGAGATCGAATTCCGATTGGGAGTTACAACCCTTCCCTGGCGCTGCTCGGAACCTCGCCATCAGCGGCGTCCACGCCTACTTCCGAGTATCGCGATGGCGACGGAGAATTCTCCGAGGATTCCTCCGGTTGGTTCCTTCGCAGCGAATCGAGTTTTGCCGTCACAGAGTTCGATTTGCCGGCGAAGCCTCTGGAAAATTCATCGGAGAATTGTTTAACCGGCAGTGTGAATTCGAAAAATGTAGCCGGATCCAGAGCCGGAGCTATAGCCGGAACCACCGCAGAAAGGATGGAAGGAACTGCCAAAGAAGAACGCAACGATGTGCCCTCAATTTCGAAGCCAGTTAAGGCAAACACTACGAAGGCCGAGAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTACTTCTAAAGCTGATGGCAGAGCAGAACCTGGTAAAGGTGTGAAGCAGTCTTCCGGGAAGAAAGATGGACCTCCTGTAACATCTTCGACAGCTACTGACAAGAAATCAGGTGGTCGTTCTTTGGAGAAAGAGAGGAAAAAAGATGTTCCTCCTCCACGTATGCAATTTGACGACAAAAGTAGAGTTGAAAAGGCCAAAAGGCGTGCATTAGTCAATCAAACTGAAGCTGTAAACAGAGTTGAATTATTTCGTCATTTGCCTCAATACGAATATGGTTCTCAGCTTCCTAAGCTTGAATCAAAGCTTTTCCAAATTGATTCAGTGCATCCTTCTGTGTTCAAGGTACTCTTTTGGAGTTTCATAAGGTTGGATTGCGTTACTTGGCAGGAGGTACATCTGGTGATAATGCTCGTTGTATTGAAATGCTCAGAGCCTTTCAAGAAGCAATCAGAGACTACTCTACTCCTCCTGAAAAAGCTCTTGTTAGGGACTTAA 1047 0.4919 MDPKFRRVGFEPDPNQSQYPLTVPPPRLLSERTAAVPVPEIGFRRQFPGDRIPIGSYNPSLALLGTSPSAASTPTSEYRDGDGEFSEDSSGWFLRSESSFAVTEFDLPAKPLENSSENCLTGSVNSKNVAGSRAGAIAGTTAERMEGTAKEERNDVPSISKPVKANTTKAERRALQEAQRAAKATSKADGRAEPGKGVKQSSGKKDGPPVTSSTATDKKSGGRSLEKERKKDVPPPRMQFDDKSRVEKAKRRALVNQTEAVNRVELFRHLPQYEYGSQLPKLESKLFQIDSVHPSVFKVLFWSFIRLDCVTWQEVHLVIMLVVLKCSEPFKKQSETTLLLLKKLLLGT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3102 348 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 15 301 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 111 248 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 1 25 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 65 90 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 114 130 - -
Amo20g3102 348 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 15 301 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 205 219 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 220 248 - -
Amo20g3102 348 MobiDBLite consensus disorder prediction 166 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3102 Amo-Chr20 135196828 135199736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3102 161 299 Eukaryotic Initiation Factors Gene Family AT5G38640 58.824 5.24e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3102 K03680 - gmx:100778711 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3102 20 135196828 135199736 Amo20g3102 20 135196828 135199736 ECH