Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3029 ATGGATCGAATTAGGACTCCTTTCTTGGAAAAAGGAGAGTATAGAGAAGATGCGTTATTCTATGGGAATCCAAACTTTGGAGTTACAAGCTGGATGAGCATGACGGTGTATGAAGCTGATTTTGGTTGGGGAAGGTTAGTTCACTTTGGTCAAGGTGCTTTGTTTCCCTTTGATAGGGGATTGTTGGCTCTAAGCCCAGACATGGATGGATCTATTCTTGTCTTCATGCATTTTCAGGAAGCTCACATGCAAAATTTCATCAAGATCGTGCAGTTATTTTTGTGTAAAATTAATAATAAAAAATTATTAAATAATTTAATAAATTTAATTAAATTATTTAATAAAAAAATTATGTATAATTATTTTTATATGAAATTAATAATTAAAAATTATTAA 396 0.3005 MDRIRTPFLEKGEYREDALFYGNPNFGVTSWMSMTVYEADFGWGRLVHFGQGALFPFDRGLLALSPDMDGSILVFMHFQEAHMQNFIKIVQLFLCKINNKKLLNNLINLIKLFNKKIMYNYFYMKLIIKNY* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3029 131 Gene3D - 5 91 IPR023213 -
Amo20g3029 131 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 89 - -
Amo20g3029 131 Pfam Transferase family 21 87 - -
Amo20g3029 131 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3029 Amo-Chr20 133162125 133162520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3029 21 90 Monolignol Biosynthesis Gene Families AT5G48930 42.254 4.19e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3029 K13065 - aip:107646786 99.3673