Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3019 ATGAGAGAGAACCAGAATCTAAGTCTCATTGAGAGCTTTCTTGTAAGAGTTCAATGTATTGGACAATGTTTCTATATCAAAGAAACATTCTGCCAAGATGAAGAGCTTCATCAGATAATGCTAAATCCGGATCATCTTATAGCGTCAAGGCTCGCTGCCGTCACTGATGACGACATCACCGCTGTTGCTCCTCTTCATAATCATCATCCTGTTCCTCATCAGTTTCCGCAGGTGTCCGCCGTTGAAGGCTCATCCTCCTCCGCGGCTGAGCCTTTTGCCAATGGGATTCATGCTGCGGTGGCAAGTGGAGTCTCAGCACCCTCGTTATCATCAGGAGGCGGTAGTGGTGAAGGAGAAGGGGCAGTTGCGGTGGCAAAGGAGAAGAGAAGGGCGGTGGAGGAACCAGTGGACAAGGCCAGCCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCTGCTAGGTCTAGGAACGCAAACAAGCTGAAAAGAAAGAGGTTGAAGGAGAAGAAGGAGGTGCTTGATGAGAATGAGTGGTGGGACAAGATAGGGAAGATGAAGATGCTTGGGAAAAGAAAGCCATGCTTATAA 594 0.4848 MRENQNLSLIESFLVRVQCIGQCFYIKETFCQDEELHQIMLNPDHLIASRLAAVTDDDITAVAPLHNHHPVPHQFPQVSAVEGSSSSAAEPFANGIHAAVASGVSAPSLSSGGGSGEGEGAVAVAKEKRRAVEEPVDKASLQKQRRMIKNRESAARSRNANKLKRKRLKEKKEVLDENEWWDKIGKMKMLGKRKPCL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3019 197 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 110 159 IPR043452 GO:0003700|GO:0045893
Amo20g3019 197 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 110 159 - -
Amo20g3019 197 MobiDBLite consensus disorder prediction 148 167 - -
Amo20g3019 197 Coils Coil 158 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3019 Amo-Chr20 132885393 132888441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3019 31 158 bZIP Transcription Factor Family AT5G44080 35.915 4.01e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3019 K14432 - ahf:112720842 117.857