Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3014 ATGGCTCCGCCGTCTCCGCCGCTGATTGACATTACTCCTCCCCCATCGCCATTGCTGCTCCAACCTACAGCAGCGCCACCACCATTTCCTTCTCCTCCATCACCGCCGTTAGTGCTTCCAATGCCTACAGCACCACCGCTTACCTCGCCGCCGATCACTTCTCCGCCGGAGGTGGTGTCTATGCCTACAAACTCCCCGCCTCCGGTTACTCAAGTCCCGCCGGCGATTTCCTCGTCGCCGCCTCAGCCGGAAATTCCATTCGTCGCTGCTTCACCGTCGACTCCGATTACATCGAACGAGAATCCAATTCCAGCAACGCAGTCTCCTCCGAATACGGCGTTGCCGACGGCAGCATCTCCTCCGGTTCCGGCGACACCGCTTCCTTCGTCTCCGCCAACTCTGATTCCGCCGTCGGTTACTTTTCCGTCAAATGCGTTACCACCATTGCCGCTGCGTCACCGGAAAGTTTCGCCGGCGCTTCCAGTTCCGACAGCCACTTCACCACCACCACAGGAATTTTGGCCTCTGGCACCGGAAGCAGCAGCAACCTCTCCGCTGCTGCCACAGCCGCCGGCGACCGTTTACCCTTTCACGGGGCCTACATTGCCATCAACTCCAGAATCAACGCCGGCGCAGCCACCATCGAGTCGAAGCTTGCCGCTTGCGGTGGACGTTGATAAACACTCAGGGTTCGAAGTGCCAAGTGGATTCATAATTGAGGGAATTGTAATTGGTGGTATCGTTATTGGGTTTGTTGTAGCACTTATGTTACTTTTGTTCAGGAATAGAAAGAAAAAGCAGCAGCAGAAGAAGAATCTGCATACACATCAATCTGAGGAATCATCACCTTGTGTTGGAGCTAAGAAATCAGGTTCTCATGTCATCAAAGTGCTGCCAAATCCATCAAAGCTAACAGAGGGAGGTGGAGATTTCGGCCCTGTGAATGGCATTTTCACATATGATGAGCTAGTAGCAGCCACTAAGAGTTTCTCTGAAGCCAACCTTCTTGGGGAAGGTGGATTTGGTTATGTATATAAAGGAATTCTTCCAAGTGGAAAGGAAATTGCAGTTAAACAGTTGAAATCAGGAAGCCAGCAAGGAGAGCGAGAATTTCAGGCCGAGGTTGAGACCATTAGCCGGGTGCATCACAAGCATCTTGTTGAGTTGGTTGGATACTGCGTTACCATGTCTGAAAGAATGCTTGTTTATGAATTTGTTCCAAATAACACATTGGAATTCCATTTACATGGGGAAGGGAAGCCCGTTGTACGGTGGGAGAAGAGAATTAAGATTGCCCTGGGATCTGCAAAAGGGCTCGCATATCTACATGAAGATTGTAATCCAGCAATCATTCACCGTGATATTAAAGCATCTAACATCCTTCTGGACTTCAATTTTGAAGCAAAGGTTTCTGACTTCGGCCTAGCAAAGATCTTCCCCAACAACGCTGATGGTTGCATCACTCACCTCACCACCCGAGTCGTGGGAACCTTTGGGTATCTGGCTCCAGAATATGCATCAAGTGGTAAACTAACAGATAAATCAGATGTATATTCCTATGGAGTGATGCTTTTAGAACTCTTAACTGGACGTCCAGCAATCAGTACAGAAGGATCAAGAAACGTGAGCTTGGTTGATTGGGCTAGGCCCTTGCTTGCGCAAGTGCTAGAAGATGGTGATATCAGTGATCTTGTTGATCCAAGGTTGCAGAATAATTATAAAGCTGATGAGATGACTAGAATGATTACCTGCGCAGCCGCCTGCGTGCGCCATTCAGCCAGCCTTCGACCCCGTATGAGCCAAATTGCAGGTGCCTTAGAAGGATTGGTTTCTCTGTCGGATCTTGTAGGCGACATTACGCCGGGGCATACCAGAATATACAGTTGGCCAGAGAGTTCAACTTATGATGCCTGCCAATACCAACAGGACTTGAGAGACTTCAATTTGGGATTATCATCTCAACAGTGCAGCTCAAGTGTGCATAGTGAAATGACTAGTGCTTATGGTCTTTGCCTATCTGACTCAAGTAGTGAAGGTTAA 2040 0.4922 MAPPSPPLIDITPPPSPLLLQPTAAPPPFPSPPSPPLVLPMPTAPPLTSPPITSPPEVVSMPTNSPPPVTQVPPAISSSPPQPEIPFVAASPSTPITSNENPIPATQSPPNTALPTAASPPVPATPLPSSPPTLIPPSVTFPSNALPPLPLRHRKVSPALPVPTATSPPPQEFWPLAPEAAATSPLLPQPPATVYPFTGPTLPSTPESTPAQPPSSRSLPLAVDVDKHSGFEVPSGFIIEGIVIGGIVIGFVVALMLLLFRNRKKKQQQKKNLHTHQSEESSPCVGAKKSGSHVIKVLPNPSKLTEGGGDFGPVNGIFTYDELVAATKSFSEANLLGEGGFGYVYKGILPSGKEIAVKQLKSGSQQGEREFQAEVETISRVHHKHLVELVGYCVTMSERMLVYEFVPNNTLEFHLHGEGKPVVRWEKRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFNFEAKVSDFGLAKIFPNNADGCITHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELLTGRPAISTEGSRNVSLVDWARPLLAQVLEDGDISDLVDPRLQNNYKADEMTRMITCAAACVRHSASLRPRMSQIAGALEGLVSLSDLVGDITPGHTRIYSWPESSTYDACQYQQDLRDFNLGLSSQQCSSSVHSEMTSAYGLCLSDSSSEG* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3014 679 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 114 652 - -
Amo20g3014 679 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Amo20g3014 679 MobiDBLite consensus disorder prediction 114 139 - -
Amo20g3014 679 Gene3D Phosphorylase Kinase; domain 1 311 405 - -
Amo20g3014 679 Pfam Protein kinase domain 331 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3014 679 PRINTS Proline rich extensin signature 46 67 - -
Amo20g3014 679 PRINTS Proline rich extensin signature 1 17 - -
Amo20g3014 679 PRINTS Proline rich extensin signature 92 109 - -
Amo20g3014 679 PRINTS Proline rich extensin signature 33 45 - -
Amo20g3014 679 PRINTS Proline rich extensin signature 67 83 - -
Amo20g3014 679 ProSiteProfiles Protein kinase domain profile. 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3014 679 SUPERFAMILY Protein kinase-like (PK-like) 316 606 IPR011009 -
Amo20g3014 679 MobiDBLite consensus disorder prediction 1 88 - -
Amo20g3014 679 MobiDBLite consensus disorder prediction 198 219 - -
Amo20g3014 679 MobiDBLite consensus disorder prediction 198 216 - -
Amo20g3014 679 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 114 652 - -
Amo20g3014 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Amo20g3014 679 MobiDBLite consensus disorder prediction 91 113 - -
Amo20g3014 679 SMART serkin_6 330 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g3014 679 MobiDBLite consensus disorder prediction 1 139 - -
Amo20g3014 679 CDD STKc_IRAK 336 609 - -
Amo20g3014 679 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3014 Amo-Chr20 132778817 132783217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g3014 190 678 Trihelix Transcription Factor Family AT4G32710 49.903 2.11e-140 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo20g3014 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3014 - - adu:107470979 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2444 10 85726907 85730752 Amo20g3014 20 132778817 132783217 hybridization