Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2997 TCAACTCTCCTCATTCGTCTACTATCCTACGTGTGGAAGAAACCCTTCTCGCCCTTTCACTCAACTGTTAGTCAACATTTTTATTCCAGTTTTATCCTGAAACCTTTGGCTGCCCTCGAACAACACCTGTGGCGGTGCAACATCATCCTCCGGTGGCATCAGTGCTCGACCACCATCAACAAAAGGTACTATATTTCTGCTAGAGAATTTCCTCTAGCTTGTGATATAAATGAGAAGGGATGGACAAGTAGTATGCGTCAAAATGGTCTAGCCAATTGCAGTTTACCAAAAAAGTCTGATAATGATCATGTAGGTCATGAAGAAAGTGAAATGCATGAAGACACAGAGGAAATCAATGCATTGCTTTATTCTGATGATGATGACAGTGATTCTAATGATTGTGATGATAACGAGGTAACAAGTACAGACCATTCCCCTTTGGTTACTAAAAGGACCTATGGTATGCAAGAACAATTTCAACACACAACTGAGGGAGTTGCTAGCTATGATTGGCCTAACAAAAGGCCGAAGCTAGTTGATGGTGACTGCAATAGATCACCACAACCTGTGGACAGTTCCAGTTCGTTAAGACCAAATGAAAACCACGAGTGCATTAGTGATGCTGAATCACAGAATTATTTTGGCGCTGAGAAAGTATGTAAATCAATAGCAGGTGATTTTCAGTTGAAAAAGGACCAGATTCGAGAATTATTGAGAGTTCTTGAGAACTTGATTCCTGGTGCAAAAGGAAAGCAGCTACTTTTTGTCAATGATCAAACTATTGAGTACTTGAAATTTTTGGCGTCCAAAACTCAATACTTGGAGTAA 828 0.4022 STLLIRLLSYVWKKPFSPFHSTVSQHFYSSFILKPLAALEQHLWRCNIILRWHQCSTTINKRYYISAREFPLACDINEKGWTSSMRQNGLANCSLPKKSDNDHVGHEESEMHEDTEEINALLYSDDDDSDSNDCDDNEVTSTDHSPLVTKRTYGMQEQFQHTTEGVASYDWPNKRPKLVDGDCNRSPQPVDSSSSLRPNENHECISDAESQNYFGAEKVCKSIAGDFQLKKDQIRELLRVLENLIPGAKGKQLLFVNDQTIEYLKFLASKTQYLE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2997 275 MobiDBLite consensus disorder prediction 92 146 - -
Amo20g2997 275 MobiDBLite consensus disorder prediction 99 119 - -
Amo20g2997 275 MobiDBLite consensus disorder prediction 120 136 - -
Amo20g2997 275 PANTHER TRANSCRIPTION FACTOR SAC51 54 274 - -
Amo20g2997 275 PANTHER TRANSCRIPTION FACTOR BHLH145 54 274 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2997 Amo-Chr20 132302017 132306643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2997 105 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 42.604 4.04e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2997 - - ahf:112717827 338.191