Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2985 GTTTTTCATCTTCTTCTCTCCTCTTCCCCTTTTGCTCTTGATATAGCACTGGGAATTGGTAGACTTCCAAAGGGACGTGTTGTGGAAATATATGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTACATGTGATTTCAGAGGCACAGAAGCAAGGAGTAGGGAAGTTACCAGCATCTCAGGCTAATCCTGAAGTGGTCTCTGCTTTTAGAAGAGAGGAAAAAGAACAGGCCATGAGGCTTTTGGACAATTACTTGAGAATTTGCCGTGCAGCTAAGGTTAAGGCAAGCTTTATGATGACAGAAGCTGATCAAGTCCAGAAAGGGATTGTTGCTTTGGTTGTCGGGCATAATATTAGGAGGCTTGTTATTGGAGCAATYCCCGAAGGAGGTAAACATATTTGGACAAGAGAAGCTTCTGAAAAACCTTGTTCTTTATCACCGTGTGAAACAATTGAAACAGAAGGCACTTTTGCCGCCGAATCAACTACATCCAGCGGTCCATTGCCCCAAAATTCTGCTGAGAGTTCTTCAGATACTCATTTAGAGGCTGAAGAAGAAAGAGTTAATAGTCAACTTGTTGAAGTCAAACAAGAAGCTGATGAAGCAGCAGATGAGTCTTTTGTTGAGCTATTGAAGTTGGAAGCTGAAGCCACTGAGGCCATAAGGAAGGTCAATTTGTTTGAATCTGCTCATGCACAGGAAGTAAAGCTCAGACAAGAGGCAGAGGATGAGTTGAGAACCACAGATTGTGGTGAACAAGCACTTAGTCTTGTGGATACCTTAATCCGTAGTYGTTCAGTTGACGTAATTGTTGTTGYCAGTAAAACCTGTGATCTTATCAGGAATTTTCCGGAGTACCTTGATGTTGTTGTAAGTGTTGCAAGAAAAACTGATGGTCGTCATTGGGCAGATTTGCTTCGAGCATTGGGATGGCTGAGAAGCGAAATTTGTGGAGAATAG 963 0.4258 VFHLLLSSSPFALDIALGIGRLPKGRVVEIYGPEASGKTTLALHVISEAQKQGVGKLPASQANPEVVSAFRREEKEQAMRLLDNYLRICRAAKVKASFMMTEADQVQKGIVALVVGHNIRRLVIGAIPEGGKHIWTREASEKPCSLSPCETIETEGTFAAESTTSSGPLPQNSAESSSDTHLEAEEERVNSQLVEVKQEADEAADESFVELLKLEAEATEAIRKVNLFESAHAQEVKLRQEAEDELRTTDCGEQALSLVDTLIRSXSVDVIVVXSKTCDLIRNFPEYLDVVVSVARKTDGRHWADLLRALGWLRSEICGE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2985 320 Coils Coil 182 206 - -
Amo20g2985 320 PANTHER OS02G0152300 PROTEIN 170 253 - -
Amo20g2985 320 MobiDBLite consensus disorder prediction 154 191 - -
Amo20g2985 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 68 IPR027417 -
Amo20g2985 320 PANTHER OS10G0100500 PROTEIN 43 129 - -
Amo20g2985 320 Pfam recA bacterial DNA recombination protein 6 53 IPR013765 GO:0003697|GO:0005524|GO:0006281
Amo20g2985 320 PANTHER OS02G0152300 PROTEIN 43 129 - -
Amo20g2985 320 MobiDBLite consensus disorder prediction 154 178 - -
Amo20g2985 320 Gene3D - 5 60 IPR027417 -
Amo20g2985 320 PANTHER OS10G0100500 PROTEIN 170 253 - -
Amo20g2985 320 Pfam RIC1 276 311 IPR009771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2985 Amo-Chr20 132187859 132190883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2985 72 247 U-box Gene Family AT2G45920 27.500 6.77e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2985 - - aip:107629106 439.113