Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2954 ATGGATTTCCTTTCACTTCCTACAATAACAATTCTGGTAGCTTTAGCTCTATTTCTTATCTACAACATATGGAAGATCAACAAAAGTGGTGATGATGAAACCAAGAAGCTTCAAGCACCAGAACTACCAGGTGCTTTACCTTTGATTGGTCACCTCCATTTACTAGGAGCCAAAACACCACTTGCAAGAATCTTTGCTTCTTTAGCGGATAAGCATGGCCCCATATTCCAAATCCATTTAGGAGCATACCCTGCCCTTGTAATTTGCAACAAGGAGGCAATCAAAGAGTGTTTCACTACAAACGACGTCGTTTTAGCTTCGCGCCCAAAGTCAAGCCATGGAATTCACCTTGGTTACAACTTTGCAGGGTTTGGATTTGCTCCTTATGGCCCCTATTGGACCAAGTTGAGGAAGCTAGCCATGCTTGAACTTCTATCGCCGCGCCGCATCGAATCTTTGAGGCATGTTTATGAATCCGAGGTTGATACTTTGATCAATGATTTGTTGTCTTATCTTGGTGCGGATTCAGGGGTTAAGGTTGTCATAAGTGAGTGGTTGGAACGCCTCACATTCAATATAATCATAAAGATGATTGCCGGAAAGAGGTATTTTAGCTACTTGAAAGATGCGGACGATGAAGAATCACATAGAATTGTGAAGCTTGTGAAAGAGTTCATGCACATTTCTGGTGAGCTTGTTCCTTCAGATTTGATTCCAATTATTGGATGGTTACCAGTACAAGGGCAAGTTCTTAAGAACATGAAACGAATTGCAAAGGATTTGGACACAATTGTAGGAAATTGGGTTGAAGAGCATGATGTGAAGAATGATGATCAAAAGAAAAAGAACTACTCATCAAGTGAGAAACAATATTTCATTGACTTTATGCTTTCTGTTATTGAAGATGATCCTGCCTCTGGCCATACCCGGGACAATATCATCAAGGCAAATATTATGAATATAATGCTGGCGGGGTCAGACACAACGTCCAGCACAATGACATGGATCCTATCCCTTTTATTGAACAACAAACATGCTTTGAAGCGTGCAAAGGACGAAATTGACCTTCATGTGGGTAAGGACAAAATGGTAAAAGCATCCGACATAAAAAACCTAGTGTATTTACAAGCAATTTTGAAAGAAACTCTAAGATTATATCCAGCAGGGCCTCTATTAGTACCTCATGAGGCAAGAGAAGATTGTAATATTCATGGCTATTACGTACCAAAAGGGACGCGTGTCTTTGCCAATGTATGGAAGCTACATAGAGATCCAAGCATTTGGGCAGAACCCGAGAAATTTTCACCGGAAAGATTTATTAATGGCAATGGAGAAGTTAATGAAGATCAGAATTTCGAATACCTTCCATTTGGTTCAGGAAGAAGAGCTTGTCCTGGATCAACATTTGCCATTCAAGTGATTCTCATAACACTTGCTCGCTTGATTCAAAAGTTTGATTTGGAAGTTCCAATAAAGGGTGAGGCTATTGATATGAGAGAAGGGTTGGGCATAACCTTACCCAAGTTAACTCCCTTACAAATCATTTTGACCCCACGCTAA 1560 0.4032 MDFLSLPTITILVALALFLIYNIWKINKSGDDETKKLQAPELPGALPLIGHLHLLGAKTPLARIFASLADKHGPIFQIHLGAYPALVICNKEAIKECFTTNDVVLASRPKSSHGIHLGYNFAGFGFAPYGPYWTKLRKLAMLELLSPRRIESLRHVYESEVDTLINDLLSYLGADSGVKVVISEWLERLTFNIIIKMIAGKRYFSYLKDADDEESHRIVKLVKEFMHISGELVPSDLIPIIGWLPVQGQVLKNMKRIAKDLDTIVGNWVEEHDVKNDDQKKKNYSSSEKQYFIDFMLSVIEDDPASGHTRDNIIKANIMNIMLAGSDTTSSTMTWILSLLLNNKHALKRAKDEIDLHVGKDKMVKASDIKNLVYLQAILKETLRLYPAGPLLVPHEAREDCNIHGYYVPKGTRVFANVWKLHRDPSIWAEPEKFSPERFINGNGEVNEDQNFEYLPFGSGRRACPGSTFAIQVILITLARLIQKFDLEVPIKGEAIDMREGLGITLPKLTPLQIILTPR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2954 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 519 - -
Amo20g2954 519 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 Pfam Cytochrome P450 40 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Amo20g2954 519 SUPERFAMILY Cytochrome P450 43 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2954 519 PANTHER CYTOCHROME P450 82C3-RELATED 13 519 - -
Amo20g2954 519 Gene3D Cytochrome P450 30 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2954 Amo-Chr20 131917079 131919461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2954 39 519 Cytochrome P450 AT4G31940 46.951 3.68e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2954 - - gmx:100790675 771.541