Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2935 ATGCGAGTCATCCACCTCTTCTTCTTCCTCCACAACCTCCCAAAGCTTCACCCAATGGAGGTTCTCTCTCCCGACAACTCCCTCCACCACCACCACCACTACTCTTCCGCCACAACAACCACCACCAACTCCACCACCTCCGCCCCTGACCTCGACGGCGCACCCGCCGAGCGCGCCCTCGCCGCCCTGGAGCTGATGTGCACGGTGGCGGAGGGCGCGGAGGCGGTGAGGGCTCACGCGCTTGCAGTGCCTGTGATGGTAACCATGATGGGGAGGACGGGTGCTCGCGGGAAGGAGTACGCGATCGGAGTGCTTGCGGTGGTGTACGGAGGTTCTGCGGCTGCGGAGAGGGAGACGGCTGCTCCGCCTGAGGAAGTGGCGCGTGCAGTGGAGCTTGCGCTTCAGGGAGAGTGCAGCGCGAGAGGAAGAAGAAAAGGAAGCCAGCTTTTGAAGACTCTTCAGCTTCTTTCTGACTCAAATTATGAGTCTCCTCACTCTCACATCAATAATGAAGATCAACCAAGTTGA 528 0.5985 MRVIHLFFFLHNLPKLHPMEVLSPDNSLHHHHHYSSATTTTTNSTTSAPDLDGAPAERALAALELMCTVAEGAEAVRAHALAVPVMVTMMGRTGARGKEYAIGVLAVVYGGSAAAERETAAPPEEVARAVELALQGECSARGRRKGSQLLKTLQLLSDSNYESPHSHINNEDQPS* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2935 175 MobiDBLite consensus disorder prediction 27 52 - -
Amo20g2935 175 MobiDBLite consensus disorder prediction 33 50 - -
Amo20g2935 175 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 48 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2935 Amo-Chr20 131413126 131413927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2935 48 170 U-box Gene Family AT1G49780 34.959 2.11e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2935 - - ahf:112716144 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2935 20 131413126 131413927 Amo20g2935 20 131413126 131413927 ECH