Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2929 ATGACAGAAAGTGAAAACCACGTCACCCAACTCTTCTCCTGCGGCTTCTTCCGCCACTGTGCCCAAACTGTTCTCAGCCCCACCGGCAACACCCTCCACTCACCACCCCTCCCCAGCACTCCTCCACCACCGCCACCGCCGCCACCACCACCACCGCCTCACAACCTTCGCAACTCATGCGAGTCATCCACCTCTTCTTCTTCCTCCACAACCTCCCAAAGCTTCACCCAATGGAGGTTCTCTCTCCCGACAACTCCCTCCACCACCACCACCACTACTCTTCCGCCACAACAACCACCACCAACTCCACCACCGCTTCTACTTCCCAACAATCTCGAAGAACTTTTTCACCTCTCTGAGCTTCAACTCACAACCGGCTCCGAATCCGACCGCGCCGCAGCCATCCACCTTCTAGAACGTTCTCTCGTCCCAAACCCTCCTCAGGACCAGCCACCATGTCCACCCGCCCTCCTCCGCCACGTCATCCGCCACCTCACCGCCACCACCAAGATCCTCTTCGCCCTCTGCCTCTCCCCCTCCAACCGCCGCCTCGCCGTTGAYGCWGGKGCCGTCGCAGCCATCGTCGAGTCCGCCCCTGACCTCGACGGCGCACCCGCCGAGCGCGCCCTCGCCGCCCTGGAGCTGATGTGCACGGTGGCGGAGGGCGCGGAGGCGGTGAGGGCTCACGCGCTTGCAGTGCCTGTGATGGTAACCATGATGGGGAGGACGGGTGCTCGCGGGAAGGAGTACGCGATCGGAGTGCTTGCGGTGGTGTACGGAGGTTCTGCGGCTGCGGAGAGGGAGACGGCTGCTCCGCCTGAGGAAGTGGCGCGTGCAGTGGAGCTTGCGCTTCAGGGAGAGTGCAGCGCGAGAGGAAGAAGAAAAGGAAGCCAGCTTTTGAAGACTCTTCAGCTTCTTTCTGACTCAAATTATGAGTCTCCTCACTCTCACATCAATAATGAAGATCAACCAAGTTGA 978 0.6074 MTESENHVTQLFSCGFFRHCAQTVLSPTGNTLHSPPLPSTPPPPPPPPPPPPPHNLRNSCESSTSSSSSTTSQSFTQWRFSLPTTPSTTTTTTLPPQQPPPTPPPLLLPNNLEELFHLSELQLTTGSESDRAAAIHLLERSLVPNPPQDQPPCPPALLRHVIRHLTATTKILFALCLSPSNRRLAVDAGAVAAIVESAPDLDGAPAERALAALELMCTVAEGAEAVRAHALAVPVMVTMMGRTGARGKEYAIGVLAVVYGGSAAAERETAAPPEEVARAVELALQGECSARGRRKGSQLLKTLQLLSDSNYESPHSHINNEDQPS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2929 325 Gene3D - 122 311 IPR011989 -
Amo20g2929 325 MobiDBLite consensus disorder prediction 34 56 - -
Amo20g2929 325 MobiDBLite consensus disorder prediction 57 92 - -
Amo20g2929 325 MobiDBLite consensus disorder prediction 28 109 - -
Amo20g2929 325 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 309 - -
Amo20g2929 325 MobiDBLite consensus disorder prediction 93 108 - -
Amo20g2929 325 SUPERFAMILY ARM repeat 124 259 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2929 Amo-Chr20 131318301 131319718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2929 163 304 U-box Gene Family AT1G49780 37.063 4.54e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2929 - - ahf:112716144 454.907