Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2889 GGGGAAAATAGTGTACGGGGTGCCGTCGATGGTAACAGGTCGGCTGGTGCAGATGATACGGCAGAGGGTGGTCTCAGTCGTCCAGTCGGTGCGCAAGACTTCTTGGGAAAAGAGTTTGCAACGAAGGAGGATGCTTATGCTACCTATAAGGAGTTCGCTAAATTAAGGGGTTTTGGAGTTCGAAAAGGAGATGTAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTCTGCCATCGACAAGGTACAAGACATCCTAAGCACTATGACCGTCCTGAGCGAGTAAGGGAGGAGAGGTTGGAGAATCGCACGAACTTCATACACCCACAGACGAACTGCGGTATCCGAATTGTCCTTGTGCCATTTAAGACTACAGAGATGTATTTACTAAATGATAAGTCTCCTTATGAAAATGATTTATCACACCCATCCTTGAATAGTAGTACCACCAAAGAGACTTCAAAACACATACAGTTGTTGCCACCTCATGAGGCCCTTGTGTATGCAAAGAAAGAGATTGATAATACCCCTTTGGTTAATGAAGGTCTTGATCTCTATGCCCCTTCAGGGTGA 576 0.4583 GENSVRGAVDGNRSAGADDTAEGGLSRPVGAQDFLGKEFATKEDAYATYKEFAKLRGFGVRKGDVARVNGVLIRRDFFCHRQGTRHPKHYDRPERVREERLENRTNFIHPQTNCGIRIVLVPFKTTEMYLLNDKSPYENDLSHPSLNSSTTKETSKHIQLLPPHEALVYAKKEIDNTPLVNEGLDLYAPSG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2889 191 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 31 95 - -
Amo20g2889 191 Pfam FAR1 DNA-binding domain 49 106 IPR004330 -
Amo20g2889 191 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 95 IPR031052 GO:0006355
Amo20g2889 191 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2889 Amo-Chr20 130075754 130077399 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g2889 FAR1 9.8e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2889 - - aip:107620850 208.764