Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2842 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGAAAGTATGAGCTTGGACGCCAACCAGCCAACACTAAGCTATCGAGCAATAAGACGGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACAGGAAACTATTCGTGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCAAACAATGAGCTCGTGAGAACTCAGACCCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAGCATTACGGTGTTGATATTGGCAGGAAGAAGAAAACAGCAGCTGCCAAGAAGGATGCTGCTGAGGAAGGTGAGACCCCTGCAGAGGAAGCCAAGAAAAGCAACCATGTGCAAAGAAAAATCGAGAAACGCCAGAAAGATCGCAAACTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTACATTTTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAAATCCAGAAAAAGAAGGGAAAGGGTGCTGCTTAG 657 0.4764 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAAEEGETPAEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2842 218 MobiDBLite consensus disorder prediction 133 168 - -
Amo20g2842 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo20g2842 218 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Amo20g2842 218 Gene3D - 26 213 - -
Amo20g2842 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 - -
Amo20g2842 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo20g2842 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Amo20g2842 218 MobiDBLite consensus disorder prediction 1 22 - -
Amo20g2842 218 CDD Ribosomal_S8e_like 5 197 - -
Amo20g2842 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2842 Amo-Chr20 128573964 128576391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2842 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.951 1.43e-127 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2842 K02995 - cpap:110821826 369.392