Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2840 ATGATAAATGTTTTTAGCTACTTGCACTCAGCATTCTCCCCACCTATTGCCCATGGAAACTTGAAGGCTGCCAATATTCTTCTGGATGAGAATTTGATGCCTTGTCTTTCTGACTGTGGCGTGGCTACTTTGAGACCACTGGGGAGCATTCAGGCTACCGAGGCTCTTATTGATGTAGGTTACCCGTCACCTGACCATGGCAAAGCAGGAGAGAGCAGCAGAAAGAGAGATGTGTGTGCCTTTGGGGTACTGCTTCTGGAAATATTAACGGGAAGAAAAGCATTCTATGGGAATGCATGTTATGTTGAAGGTGGCATCGTGTTAACTGTTGATTCATTAGAGAACGAGGGAGGAAACCAAAAAAGCATACCAATTTTTGACATGGAGTATGACTATTTAACAGTCGATTTCTTTTGGAAGCTTCCTCAAGATGTTGACAAGGGTGGAAATCCTACCCACTCAATTTTTGATGGATATAATGATTTGTATCTAAGGAGAATTGGAACAACAATTTCGTCTTATGTCAATATGGTGTGTACAAGCTTGTTGGAAGCAAAACAAAGCCTACTTGATCACTTTTTCACGGAGCTAGGCAAAATGGTTCAAAAGCGGTTGTCATCATTGCTGAATGAGGATCCTGCGATCATGAAAAGATGTGGTGCCCTTGAAAGAGGTTCGAGTTATATTGGAGTGTACAAGCTGAGATAG 708 0.4209 MINVFSYLHSAFSPPIAHGNLKAANILLDENLMPCLSDCGVATLRPLGSIQATEALIDVGYPSPDHGKAGESSRKRDVCAFGVLLLEILTGRKAFYGNACYVEGGIVLTVDSLENEGGNQKSIPIFDMEYDYLTVDFFWKLPQDVDKGGNPTHSIFDGYNDLYLRRIGTTISSYVNMVCTSLLEAKQSLLDHFFTELGKMVQKRLSSLLNEDPAIMKRCGALERGSSYIGVYKLR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2840 235 PANTHER DYNAMIN-LIKE PROTEIN 1E 109 224 - -
Amo20g2840 235 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Amo20g2840 235 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2840 235 PANTHER DYNAMIN 109 224 IPR022812 -
Amo20g2840 235 SUPERFAMILY Protein kinase-like (PK-like) 5 99 IPR011009 -
Amo20g2840 235 Pfam Protein kinase domain 4 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2840 Amo-Chr20 128486121 128487574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2840 7 95 Strubbelig Receptor Gene Family AT5G06820 59.574 6.46e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo20g2840 Pkinase 2.5e-10 CL0016