Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2823 ATGCTATTAGAAATAAAGATCCAAGAGAAGATGGAAGAAGATGAATACATGTTATTAGAAAGCATGGCGGGGTGTTTTGGTTTTCTAGTTTTGTATATCTTGGTAAAACTTGTGCATAGCATATGGTGGAAACCAACAAGTACAGAGAAGTTATTGAAGAAGCAAGGGATTAAAGGGACTTGTTACAAACCTTTTAAGGGTGACATCCCAGAAATGAATAAGTGTGCTCGCGAAGCAGCATCAAAGCCTATCAATCTCAACCACCAAATCGTCCCACGAGTCTTCCCTTTCGTTCACAAAATGGTTCGAAAATACGGAGAAGTTTCAGTATGCTGGTTTGGAAGAAAAGCAAGAGTGATAATAGTGGACGCAGAACTTACCCGTTTGATCTTATCAAACAAGAACGGTCAGCTTATTAAGCCGCCGCGTGACCCCTTAATTAAGCTCCTAACCATGGGTTTGACTTCCCTCGAGGGAGAAAAATGGTCTCAACGCAGAAAAGCCGTTACATCTGCATTTCTCCTCGACAAGTTGAAGGCAATGCTTCCGGCATTTTCGTACAGTTGTTGTACCATGATTGAACGGTGGCAAAAATTCGTGGAACAAAACAATGGATCCTCTGAGTTGGATGTCACTTCTGAATTGGACATTCTCACGGGTGATGTTATTGCTCGAGCAGCCTTCGGTAGCAGCTACAAAGAAGGAAAGAGAATCTTCGACATACAAAAGGAGATTGCAATCTTGGTGCATGATGCCCTCACCAACATCTACATCCCTGGTTTCAGATTTATACCAACAAAGAAGAACAAGAAACGATACAAGTTAGATGTTCAAATCAAAGATATATTGATGGATATGATTAAGAAGAAAGAGCACGCAATGAAAGAAGATGAATCAGAAGGGCGGAGTAGTAATGATTTAATAAGCATTCTACTGGAATCAAGAGAAGTAGGAAAGTCTCTAACAACCAAGGACGTGATTGAGGAATGCAAGTTGTTCTACTTTGCTGGCCAAGTCACCACAAAGAACCTGCTTGCGTGGACCATGGTAGTTTTATCTATACACCCTGATTGGCAAGAAAAAGCAAGACAAGAGGTATTAGATCTTTTCGGCAAAGAACAAATACCTCCCGATTTTGAAGCCATAAACCGCCTCAAGATAGTGTCGATGATATTGTTGGAAGTTTTGCGACTATATCCACCTGTACCAGTAATTTCTCGGTACACAACGTGTGAAACGACGGTAGGAAGCATGGCAATTCCAGCAGGGGTGGAGCTATATTTACCATTGTTGCTTCTCCATCATGATGGGAGATATTGGGAGAATCCACAAGAGTTCAACCCAGAGAGGTTTAGCCAAGGGATTTCAAAAGCTTCTAAGGATCAAAATGCTTTCTATCCATTCGGTTGGGGCCCAAGAATCTGCCCTGGCCAAAATTTTGCCCACTTGGAATCAAAGATGGCTCTGGCTATGATTCTTCAACATTTCTCACTCCATCTTTCGCCTTCTTATTCTCATGCTCCATGTGCCCGTCTTACTCTTACGCCACAGTATGGGGCTCCCGTTATTGTTCAATGCATTTCAATTTAG 1590 0.4195 MLLEIKIQEKMEEDEYMLLESMAGCFGFLVLYILVKLVHSIWWKPTSTEKLLKKQGIKGTCYKPFKGDIPEMNKCAREAASKPINLNHQIVPRVFPFVHKMVRKYGEVSVCWFGRKARVIIVDAELTRLILSNKNGQLIKPPRDPLIKLLTMGLTSLEGEKWSQRRKAVTSAFLLDKLKAMLPAFSYSCCTMIERWQKFVEQNNGSSELDVTSELDILTGDVIARAAFGSSYKEGKRIFDIQKEIAILVHDALTNIYIPGFRFIPTKKNKKRYKLDVQIKDILMDMIKKKEHAMKEDESEGRSSNDLISILLESREVGKSLTTKDVIEECKLFYFAGQVTTKNLLAWTMVVLSIHPDWQEKARQEVLDLFGKEQIPPDFEAINRLKIVSMILLEVLRLYPPVPVISRYTTCETTVGSMAIPAGVELYLPLLLLHHDGRYWENPQEFNPERFSQGISKASKDQNAFYPFGWGPRICPGQNFAHLESKMALAMILQHFSLHLSPSYSHAPCARLTLTPQYGAPVIVQCISI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2823 529 PANTHER CYTOCHROME P450 72A15-LIKE 17 525 - -
Amo20g2823 529 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 SUPERFAMILY Cytochrome P450 88 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 525 - -
Amo20g2823 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Amo20g2823 529 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 Pfam Cytochrome P450 94 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2823 529 Gene3D Cytochrome P450 41 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2823 Amo-Chr20 127730286 127732635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2823 42 527 Cytochrome P450 AT3G14620 46.721 1.20e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2823 - - aip:107623710 1053.89