Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2822 ATGAGAGATTCTCCTCCCACAAGCTCGCGAGAGCTAGGGTTTCTGAGGAAGGGATCGTTGAAACAATTCATAATGATGATGATGATGAAGCGCCCGATGCTGCGGAGAATGGAGTTGCGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTTAAGGGCGTTCACTCCACCGATAATGAAAAATGCATAATCAAGATCCTCAAACTCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTACATAATCTTTGTGGAAGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATTCGATATTATATCTATGAACTTCTAAAGGATATACATTGGAGAGACACGTGGAATGGAGGGATTGGGTGA 486 0.4177 MRDSPPTSSRELGFLRKGSLKQFIMMMMMKRPMLRRMELREQDDYEVVRKVGRGKYSEVFKGVHSTDNEKCIIKILKLVKKKKLKREIKILHNLCGSPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKDIHWRDTWNGGIG* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2822 161 Pfam Protein kinase domain 45 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2822 161 PANTHER CASEIN KINASE II SUBUNIT ALPHA 39 152 IPR045216 GO:0004674|GO:0006468
Amo20g2822 161 SUPERFAMILY Protein kinase-like (PK-like) 25 148 IPR011009 -
Amo20g2822 161 PANTHER CASEIN KINASE II SUBUNIT ALPHA-2 39 152 - -
Amo20g2822 161 ProSiteProfiles Protein kinase domain profile. 45 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2822 161 Gene3D Phosphorylase Kinase; domain 1 34 121 - -
Amo20g2822 161 SMART serkin_6 45 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2822 161 ProSitePatterns Protein kinases ATP-binding region signature. 51 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2822 Amo-Chr20 127712325 127714665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2822 43 152 Core Cell Cycle Gene Families AT3G48750 30.833 3.58e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo20g2822 Pkinase 6.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2822 K03097 - zju:107409035 182.956