Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2818 ATGGAAGATTACATCTTCAAAACCATGGGTGGCTGTTTTAGTTTTCTAGTTTTGTATGGTGTGATTAAACTAGTGCATGAGATGTGGTGGAAACCAAAGAGAATGGAGAAAATGTTGAGGCAGCAAGGGATAAGAGGCTCTTCATACAGAGTCATTAATGGAGACATATCAGTGATGAATAAGTGTGACCGGGTGGCAGCTTCAAAGGCTATCGCTCTCAACCACCAAATCGTCCCTCGAGTCTTTCCTTTCTATCACAACATGATGCAGCAATATGGGGAAGTTTCACTAAGTTGGTTTGGAAGACTCCCAAGACTCATAATCGGAGACAACGAACTTGTTCGATCAATTTTATTAAATAAGAAGGGTCACATTAGGAAGCCGCCACGTAGCCCCCTTGTTAAGCTCCTTGGCATTGGATTAACTTCGCTTGAAGGTGAAATTTGGACTCAGCGCAGAAAAGCCATAACTCCTGCATTCCTCCACGACAAGTTGAAGGCATTGGTTCCGTCTACGTTTGCACATAGCTGTAGTGCCATGATAGATCGGTGGCAAAAGCTAGTGGAACACAAAGGATCTTGTGAGATTGATGCAAGTTCAGAATTCGACGTTCTCACGGGAGATGTTATTGCTCGAGCAGCTTTTGGAAGCAGCTATCAAGAGGGAAAGAAAATCTTTGACCTACAACATGAGATTAGATTCCTAGTCAATGAAGCTGCCAACGCCATTTATATCCCAGGTTTCAGATTTATACCAACACAGAAGAACAAGAGAAGGTACGATCTGGATGTTGAAATCAAATCTATATTGATGGATATGATTGAGAAGAAAGGGCATGCAATTAAGGACGGTAAAATAGAAGGCAGTGATTTGTTAAGTCTTCTACTAGAATTTAAACAACACAATAATTCTCTCACAAATGAGGATATAATCGAAGAGTGCAAGTTGTTCTACTTTGCTGGCCACGTCACCACATCCAATCTACTTGCGTGGACTATGGTGTGTTTGTCTATGGATCCTTTCTGGCAAGAAAAGGCAAGAGATGAGGTACTTCATTTGTTTGGTAAAAGAGCCCAACTTGATTTTGAAGACATAAATCGCCTCAAGATTGTGGCAATGATATTGAAGGAAGTTTTGAGACTGTATCCACCTCTACCAGTTTTATACAGATACACTAAGTGTGAAACGAAAATAGGGAACATGACTATTCCAGCAGGTGTTGAACTTGTTTTACAAGTGTTGCATATTCATCATGATAACAAATATTGGGAGAAGGCAGAAGAGTTTAATCCAGCAAGGTTTGCTGATGGGATTTCAAATGCTTCTAATGAAGATCATGCTGCTTTTTATCCATTTGGATGGGGTCCAAGAATCTGTGTTGGACAAAACTTTGCATACTTGCAAGCAAAGATGGCACTCTCTAAGATTCTTCAAAATTTCTCGTTCCACCTTTCACCCTCTTATTCACATGCTCCATCTAACTATCTTACTCTCAAGCCAATACATGGAGCTCCCGTTATTATTCATCGCATTTCAGACTCTTAA 1545 0.4052 MEDYIFKTMGGCFSFLVLYGVIKLVHEMWWKPKRMEKMLRQQGIRGSSYRVINGDISVMNKCDRVAASKAIALNHQIVPRVFPFYHNMMQQYGEVSLSWFGRLPRLIIGDNELVRSILLNKKGHIRKPPRSPLVKLLGIGLTSLEGEIWTQRRKAITPAFLHDKLKALVPSTFAHSCSAMIDRWQKLVEHKGSCEIDASSEFDVLTGDVIARAAFGSSYQEGKKIFDLQHEIRFLVNEAANAIYIPGFRFIPTQKNKRRYDLDVEIKSILMDMIEKKGHAIKDGKIEGSDLLSLLLEFKQHNNSLTNEDIIEECKLFYFAGHVTTSNLLAWTMVCLSMDPFWQEKARDEVLHLFGKRAQLDFEDINRLKIVAMILKEVLRLYPPLPVLYRYTKCETKIGNMTIPAGVELVLQVLHIHHDNKYWEKAEEFNPARFADGISNASNEDHAAFYPFGWGPRICVGQNFAYLQAKMALSKILQNFSFHLSPSYSHAPSNYLTLKPIHGAPVIIHRISDS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2818 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PANTHER CYTOCHROME P450 72A15-LIKE 1 509 - -
Amo20g2818 514 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 SUPERFAMILY Cytochrome P450 77 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 Gene3D Cytochrome P450 78 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Amo20g2818 514 Pfam Cytochrome P450 82 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2818 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2818 Amo-Chr20 127662351 127669194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2818 28 511 Cytochrome P450 AT3G14680 45.603 1.59e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2818 - - aip:107623710 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2818 20 127662351 127669194 Amo20g2818 20 127662351 127669194 ECH