Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2813 TCATATGATGAGGAACACATAGATTCTTTGTATTGCTCAGAACCACATTATTTTGATGATGAGGAACATGATCATGTAGTTAAAAACTCTTGTATCAAAAGAGCAAGAACAAGAGAAGAATGGAAGAAGCAGCAGCCATGGTTGAAAACTTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTATTAACTACCTTCACAGATTCCTTTTCACCTTCACCGTGAAGAAGAAGCAGCCATGGTTAACTCATCTTGTTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACACAAGTTCCACTTCCTCTTGATTTACAAGTGGAGGACAAAAAACATGTGTTTAAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATCATATCACAAGAAGACTTAAATGTTTTCAGTTCCTCAACACATGTCAATCTCTTCTTCTTTCTCTCTTACCAGATCAAGAGAGTGAGATTCCATCACCAAGAGAGTTAGAAAGTAGGTCTTCTGGCGAGCAACAAAGAAGCATGATCTTGCATGATAAAGATTTTATGTATTAA 612 0.3758 SYDEEHIDSLYCSEPHYFDDEEHDHVVKNSCIKRARTREEWKKQQPWLKTFSFSALTASLAINYLHRFLFTFTVKKKQPWLTHLVAVACISLAAKMEETQVPLPLDLQVEDKKHVFKAKTIKKMEILVLSTLEWKMNPPTPLSFIDHITRRLKCFQFLNTCQSLLLSLLPDQESEIPSPRELESRSSGEQQRSMILHDKDFMY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2813 203 PANTHER CYCLIN D3.1 PROTEIN 49 169 - -
Amo20g2813 203 Gene3D - 138 156 - -
Amo20g2813 203 Gene3D - 50 137 - -
Amo20g2813 203 CDD CYCLIN 49 129 IPR013763 -
Amo20g2813 203 PANTHER CYCLINS 49 169 IPR039361 -
Amo20g2813 203 Pfam Cyclin, N-terminal domain 49 137 IPR006671 -
Amo20g2813 203 SUPERFAMILY Cyclin-like 48 137 IPR036915 -
Amo20g2813 203 SMART cyclin_7 46 130 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2813 Amo-Chr20 127503140 127506197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2813 30 171 Core Cell Cycle Gene Families AT4G34160 49.669 1.15e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2813 K14505 - csin:114281778 160.229