Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2785 ATGGATAATCCTTACTTTGTTGTGCCGTACCATGATCCATATGATACTCCTCCACTGAGTCCGAGTTTTTTCAACATTTCCAACCCTACTCTTCTCGATCTTACCAATGTCTCCAGTGGAACCGAATCCAGGCACTCTCAACAAAAGAGTAATGGAATTCAAGAGGCTAATCTCCAACCAACTTTTGATCCGATGATTCAAGATAATAACTCTGTTGGAGGAACAGGAGGGAATAACTTCGAATCAATTCCTTTGTTACAAGTGCATTCTGAAGAAGGTCCGTCGCATGATTTCAACAACGATGTGAATACAATTACGCTGTCCCATTGGCCCCTACCACCAGTCCCGTTTTCTTGTAGCTGTTGTAGTATCCTCAGAGAAATTGTTCACACCAATGGATTTAACTCTACGAAAGTTGAGATTCATGGAAGGCCCGGCTTGATCTCTCATGCAATTCAACATCCTACTGTGAATGGGGATTTTGTTTCCACTGGCAACCTTCAATATCAAATGATCGATTTTTGTAGGAGAAGCATTGATGACGTGAAGAATTTCCTAGTTGAGTATTGCAGAGTACAAAGTGCAGCAGGGTACTTTATGTTGCAAGATCCACTATCTGCTTATTATGAGGCCCTATGCACTGGACTTGAATGGGTCGAAGAGTTCAGCGATGACACTGACGATTTGAATGCAAGCAATTCAGATGATGAGAATGAACAAGTGGCTGACAATGGAGTAGGAGCATCAGGAAAGGCTCCTAGAAGATTATCTCTTTCGGAACAGAGGGATAGAGCGGGGAAGATGAAATTGGACGATTTTGCCCCTTATTTTCATTTTCCAATTGAGGAAGCATCGAGGCAAATGAATATCTGCCCCACCGTTGTGAAGAAAATTTGCCGTAAGGAAGGATTATCACGATGGCCTTACAGAAAGATCAAAAGCACTGTAAGGCAGATCTCACAACTTAAGAGAACGATGGAATCAAAAGATGAAAGGTCAAAGGCAAGAATTCAGGCAGAGATTTACAGGCTCCATCTAAAATTAAGAGAGATTTGTGCTGGACGATACCCATCTGGAATAGTTATACCATGA 1092 0.4194 MDNPYFVVPYHDPYDTPPLSPSFFNISNPTLLDLTNVSSGTESRHSQQKSNGIQEANLQPTFDPMIQDNNSVGGTGGNNFESIPLLQVHSEEGPSHDFNNDVNTITLSHWPLPPVPFSCSCCSILREIVHTNGFNSTKVEIHGRPGLISHAIQHPTVNGDFVSTGNLQYQMIDFCRRSIDDVKNFLVEYCRVQSAAGYFMLQDPLSAYYEALCTGLEWVEEFSDDTDDLNASNSDDENEQVADNGVGASGKAPRRLSLSEQRDRAGKMKLDDFAPYFHFPIEEASRQMNICPTVVKKICRKEGLSRWPYRKIKSTVRQISQLKRTMESKDERSKARIQAEIYRLHLKLREICAGRYPSGIVIP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2785 363 Pfam RWP-RK domain 268 314 IPR003035 -
Amo20g2785 363 PANTHER PROTEIN RKD4 2 354 IPR044607 GO:0003700
Amo20g2785 363 PANTHER RWP-RK DOMAIN PROTEIN 2 354 - -
Amo20g2785 363 MobiDBLite consensus disorder prediction 227 263 - -
Amo20g2785 363 Coils Coil 312 332 - -
Amo20g2785 363 ProSiteProfiles RWP-RK domain profile. 248 335 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2785 Amo-Chr20 126955991 126957433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2785 268 328 NLP Transcription Factor Family AT4G24020 45.902 9.65e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Amo20g2785 RWP-RK 6.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2785 - - adu:107470643 746.503