Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2747 ATGTGTTGCAATAATCAGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTAGAAGGTGCTTTAGCACAGGCTAGGCAGAGGAAGGTGAGTGCAAACACCTATCTATTATCTTTCATTTGCTTCTTTTTTTTTGTTCAAATTTGTTCTTTGATTGCTTTCCTTTATCTTTTTTTATATATAATTATTTGCCCCAAATCGGAAGTTACTGGAACTAGACCAGATGTTGAGGTTGCAGATGGAACATTCCTTGAAGAACCTGGTTCTGGTGCAGTAGCAACTGTTGATAACAAAAATGTCTTTGTTGGGACATTGGATTGGATCACCAGCAATATGCTGGTTATGCTTGCTTTAGATTCATCCATGTTACTAAGATACTGGATGATCCTTAAAGATAGACGGTTGAATGAGACTGCCGTTCTTTGTGTCCCTGTGAAAGCCACAATCAAAGAGGTAGATGGAATAAATTTAAAAGATGGGGAAGATGAGACAGATGAGCTTGATGATGCTACAAATGCTACAATTTAA 621 0.3929 MCCNNQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSIKELQNLEKQLEGALAQARQRKVSANTYLLSFICFFFFVQICSLIAFLYLFLYIIICPKSEVTGTRPDVEVADGTFLEEPGSGAVATVDNKNVFVGTLDWITSNMLVMLALDSSMLLRYWMILKDRRLNETAVLCVPVKATIKEVDGINLKDGEDETDELDDATNATI* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2747 206 Coils Coil 39 62 - -
Amo20g2747 206 PANTHER MADS BOX PROTEIN 5 61 - -
Amo20g2747 206 Pfam K-box region 5 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo20g2747 206 Coils Coil 5 25 - -
Amo20g2747 206 ProSiteProfiles K-box domain profile. 5 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo20g2747 206 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL6 ISOFORM X1 5 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2747 Amo-Chr20 125971321 125976177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2747 6 61 MADS-box Gene Family AT2G45650 69.643 9.63e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2747 K09264 - vvi:100232868 114.005