Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2737 ATGTCACAGTTTTGGGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACTTGATCAATGTGGCAGGGATGACGGCTATATTTTGGAAGGTAAGGAGCTTGAATTTTATATGAAGAAAATCCAGAAGAAGGGAAAGGGTGCTGCCTCTATTCTCATACTTGTATTTTGGATGGGATGGAATAGGTCTTATAATGACTTTAGTTATCTACATGTAATATTTTGA 234 0.3974 MSQFWEQFGGGRLLACIASRLDQCGRDDGYILEGKELEFYMKKIQKKGKGAASILILVFWMGWNRSYNDFSYLHVIF* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2737 77 Gene3D - 2 49 - -
Amo20g2737 77 PANTHER 40S RIBOSOMAL PROTEIN S8 3 52 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo20g2737 77 PANTHER 40S RIBOSOMAL PROTEIN S8 3 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2737 Amo-Chr20 125534871 125536659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2737 2 41 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 80.000 5.68e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2737 K02995 - qsu:112039094 86.6557