Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2719 ATGCATGGCGAACTCGACAATGTCTACAAAACCCTCAAGCATCTCGAGGAAACCCAAAACATCAAAATCGATCTCCTCCTCTGCTGCGGAGATTTCCAGGCTGTTAGGAATGAGCAAGATTTGAAAAGCATGAACGTTCCCCCGAAATTCCGATCCATGAATTCCTTCTGGAAGTACTATTCTGGCTTGGAGGTTGCTCCTTATCCTACCATCTTCATCGGTGGCAACCATGAAGCCTCCAATTACTTGTGGGAAATGTATTATGGAGGATGGGCTGCACCTAATATATATTTCTTGGGAGTTGCTGGGGTAATCAAGTTTGGGAATGTTCGAATTGGTGGGCTTTCCGGAATTTATAATGCTCGCCACTATAAATCAGGACACTTTGAGAGACCTCCCTATGATCAGAGCACCATCAGGTCTGTGTATCATGTTCGAGAATACGATGTTCACAAACTCATGCAAATTGAGGAACCGATTGATATCTTTCTTTCTCATGATTGGCCCGTGAGAATCACTGATTGTGGGGATTGGAGGGAGCTTGTACGGCGAAAGCCCTTTTTTAAGCAGGAGATTGAGGAAGGAAGACTTGGGAGTAAAGCTGCTTCTCAACTTCTAGGTAAACTGAAACCACAATATTGGTTTTCTGCTCATTTACATTGCAAGTTTGCTGCTCTTGTTCAGCACGGGGAAGGAGGTCCGCTGACAAAATTCCTTGCACTTGATAAATGTCTTCCTCGGCGCGACTTCTTGCAGATAGTGGAAATCGAATCAGAGGCAGGCCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCCATAACAAGGAGGTTCAACTCTATATTCCCGCTGACACCCAAGGGTGCAGATTTCAGAGGTGTGAATCTTGAGATGGATGATTGTCGCCAATGGGTTAGAAGCAGGTTACAACAGAGAGGGTGCAAACCTTTTGAATTTGTTAAAACTGCTCCGTGTTATGATCCTTCTCAATCCAATTTTCATGGTTCTTTTGCTGGTTGTCCTCGGAATCCTCAAACAGAATCTCTTTTACAGTTTCTTGACCTTCCATACCTCCTTGATAAGAATCCTGAATCAACTGACTTGTCACCTTATCCTTCTCGCTCCATTGGAAGAGATGGCCTCTCTTTCAACTTCTATGCAGCTTCATGCCCTTCAGCTGAGTTCATCATAAGGGACATAGTTACCTCTTCCTCTTCCAATGATCCTTCCATTCCAGGAAAGCTCCTCCGCTTGGTTTTCCATGATTGCTTTGTGGAGGGATGCGATGCATCTTTGATGCTAATTGGGAACAATACTGAGCAAACTGATCCAGGAAATAGGTCTGTTGGTGGATATTCAGTTATAGAATCAGCAAAAAGACTCCTTGAGATGCTTTGCCCTGAAACTGTTTCTTGTGCGGATATCATTGCTCTTGCAGCCAGAGATGCAGTTGGAATTGCTGGTGGACCAATGGTTCAAATTCCCACAGGAAGAAGAGATGGAATGGTTTCGCTTGCTTCGAATGTCAGGCCTAACATCGTGGACACAAGTTTTACAATGGATGAGATGGTTAAGCTTTTCACATCTAAAGGATTGTCTGTTCTTGATCTTGTCATCCTTTCAGGAGCTCACACCATCGGAGCGGCTCATTGCAATGCATTCAGAGGCCGATTCCAAGAAGACACGAAGGGACGGCTCACACTCATCGACAAGACTCTGGACAGTAACTATGCTGTTGAGCTAATGAAACAGTGTCCAGCAAGTGCAATGGCATCTGCTACAGTGAACAATGATCCTGAAACACCTATGGTCTTTGACAACCAGTACTATCGGAATCTCTTGGTGCACAAAGGGCTTTTCCAGTCAGATTCTGCTTTGCTGAATGAAAACAGCACAAGAACAATGGTGAAGGATTTTGCAAACAATCAACAACTTTTCTTTGTAAATTGGAGCCAAGCTTTCTTGAAGCTCACAAGTGTTGGAGTGAAAACAGGGAATGAGGGTGAAATTAGACGTACTTGTGCATCAACTAATGCATAA 2040 0.4392 MHGELDNVYKTLKHLEETQNIKIDLLLCCGDFQAVRNEQDLKSMNVPPKFRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWEMYYGGWAAPNIYFLGVAGVIKFGNVRIGGLSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPVRITDCGDWRELVRRKPFFKQEIEEGRLGSKAASQLLGKLKPQYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSIFPLTPKGADFRGVNLEMDDCRQWVRSRLQQRGCKPFEFVKTAPCYDPSQSNFHGSFAGCPRNPQTESLLQFLDLPYLLDKNPESTDLSPYPSRSIGRDGLSFNFYAASCPSAEFIIRDIVTSSSSNDPSIPGKLLRLVFHDCFVEGCDASLMLIGNNTEQTDPGNRSVGGYSVIESAKRLLEMLCPETVSCADIIALAARDAVGIAGGPMVQIPTGRRDGMVSLASNVRPNIVDTSFTMDEMVKLFTSKGLSVLDLVILSGAHTIGAAHCNAFRGRFQEDTKGRLTLIDKTLDSNYAVELMKQCPASAMASATVNNDPETPMVFDNQYYRNLLVHKGLFQSDSALLNENSTRTMVKDFANNQQLFFVNWSQAFLKLTSVGVKTGNEGEIRRTCASTNA* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2719 679 PRINTS Haem peroxidase superfamily signature 470 487 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Haem peroxidase superfamily signature 488 500 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Haem peroxidase superfamily signature 598 613 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Haem peroxidase superfamily signature 536 551 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Haem peroxidase superfamily signature 412 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 Pfam Lariat debranching enzyme, C-terminal domain 236 356 IPR007708 GO:0006397|GO:0016788
Amo20g2719 679 PRINTS Plant peroxidase signature 469 479 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 390 409 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 414 434 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 488 503 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 450 463 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 596 611 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 535 547 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 612 629 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 PRINTS Plant peroxidase signature 652 665 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 ProSitePatterns Peroxidases proximal heme-ligand signature. 536 546 IPR019793 -
Amo20g2719 679 SUPERFAMILY Heme-dependent peroxidases 380 678 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 ProSiteProfiles Plant heme peroxidase family profile. 380 678 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 CDD MPP_Dbr1_N 1 251 IPR041816 -
Amo20g2719 679 Pfam Calcineurin-like phosphoesterase 1 221 IPR004843 GO:0016787
Amo20g2719 679 CDD secretory_peroxidase 380 674 IPR033905 GO:0004601|GO:0042744
Amo20g2719 679 SMART DBR1_2 227 359 IPR007708 GO:0006397|GO:0016788
Amo20g2719 679 SUPERFAMILY Metallo-dependent phosphatases 2 234 IPR029052 -
Amo20g2719 679 Gene3D - 2 236 IPR029052 -
Amo20g2719 679 Pfam Peroxidase 403 642 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g2719 679 Gene3D - 384 678 - -
Amo20g2719 679 Gene3D Peroxidase, domain 2 514 657 - -
Amo20g2719 679 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2719 Amo-Chr20 125145026 125150387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2719 381 678 Peroxidase AT4G31760 64.765 1.14e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2719 K18328 - gmx:100812726 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2719 20 125145026 125150387 Amo20g2719 20 125145026 125150387 ECH
Amo10g2284 10 79986240 79991604 Amo20g2719 20 125145026 125150387 hybridization