Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2709 ATGGGAATATATCTAAGCACACCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAGATATGGTTTATCATCCATGCAAGGCTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGATTCTACTTCGTTTTTTGGTGTCTACGATGGGCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCAAAGTTTCTTCATCAACAGGTGCTCAGAAGTAAAGAATATGCAGATGGAGATATAGGAACCTCTCTTCAGAAAGCATTTCTAAGAATGGATGACATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAGTGTTGGGGGATAAGATAAACAAGTTTACTGGAATGATAGAAGGGTTGATTTGGTCTCCAAAAGGTACCGATGGTGGTGACCAAGTTGATGATTGGGCTTTTGAGGAGGGACCTCATGCTGATTTTGCTGGCCCAACTTCAGGAAGCACTGCCTGTGTTGCTGTTATTAGAAACAACCAACTTTTTGTTGCAAATGCTGGTGATTCGCGTTGTGTAATTTCTCGAAAGGGTCAGGCATACAATTTGTCTAGAGAYCACAAACCTGAGCTTGAGATTGAAAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCAGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTTCCCGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTCGACCTTTGTGAAGAAGATGAATTCATGGTCCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAGTTGGTAGATTTTATTCATGAACAATTGCGCTCTGAAACCAAGCTTTCTGTAGTGTGCGAAAGAGTACTCGATCGGTGTTTGGCTCCATCAACCGCCGGTGGCGAGGGATGCGACAACATGACGATGATCTTGGTGCAGTTCAAGAAGCCAGCTCAATCCAGTGCACCACCGGAAGAGCAGCAATCCTCTGCAAACGAAAAAGCTGAAGAAGCTCATGAACCAAAAGCGGATAGTAGTGAAAGTTAG 1092 0.4249 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYTDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLRSKEYADGDIGTSLQKAFLRMDDMMRGQRGWRELSVLGDKINKFTGMIEGLIWSPKGTDGGDQVDDWAFEEGPHADFAGPTSGSTACVAVIRNNQLFVANAGDSRCVISRKGQAYNLSRDHKPELEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVDLCEEDEFMVLACDGIWDCMSSQQLVDFIHEQLRSETKLSVVCERVLDRCLAPSTAGGEGCDNMTMILVQFKKPAQSSAPPEEQQSSANEKAEEAHEPKADSSES* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2709 363 Gene3D - 1 330 IPR036457 -
Amo20g2709 363 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Amo20g2709 363 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 342 - -
Amo20g2709 363 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Amo20g2709 363 CDD PP2Cc 23 329 IPR001932 -
Amo20g2709 363 MobiDBLite consensus disorder prediction 330 363 - -
Amo20g2709 363 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Amo20g2709 363 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Amo20g2709 363 SMART PP2C_SIG_2 28 329 IPR001932 -
Amo20g2709 363 PANTHER PROTEIN PHOSPHATASE 2C 1 342 IPR015655 GO:0004722|GO:0006470
Amo20g2709 363 MobiDBLite consensus disorder prediction 345 363 - -
Amo20g2709 363 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Amo20g2709 363 SMART PP2C_4 13 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2709 Amo-Chr20 124938841 124943494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2709 1 343 PP2C-type Phosphatase Gene Family AT2G25070 77.843 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2709 K17499 - gmx:100787778 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2709 20 124938841 124943494 Amo20g2709 20 124938841 124943494 ECH