Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2642 ATGTGTGGAACGAGAGCCAGAACCAACTTCCCTTACAACCCTGATTCCTCTCACTCCACGCCATCCAAGCTTCTCTCTGCTACTTTAACCGCTAAGCTTCACAGGTGTTACATGGCCTCTCTTCAAATCACTAGACCTTCTCCCATCAACAATGGCGCCTTTTCCACTGCACCAACACCCACCATCCAACAGAAGAGACCACACAAGGATGAACAACAACAACAGCAACAGCAACAAGAACAACAATCTTCATCTTCATTGGAAGATGGCAACTGGGCTTCCATGAAGAAGGTTAAAGTGGAAAATCATGAGTTTATTAAGCCTCTTGAGGAAGATCACAATCACATTGAGCAAATGATTCAGGAGTTGCTTCATTATGGCTCCATTGAGCTCTGTTCTCTTTAA 405 0.4444 MCGTRARTNFPYNPDSSHSTPSKLLSATLTAKLHRCYMASLQITRPSPINNGAFSTAPTPTIQQKRPHKDEQQQQQQQQEQQSSSSLEDGNWASMKKVKVENHEFIKPLEEDHNHIEQMIQELLHYGSIELCSL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2642 134 MobiDBLite consensus disorder prediction 1 22 - -
Amo20g2642 134 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 1 132 - -
Amo20g2642 134 MobiDBLite consensus disorder prediction 45 63 - -
Amo20g2642 134 MobiDBLite consensus disorder prediction 45 94 - -
Amo20g2642 134 MobiDBLite consensus disorder prediction 74 91 - -
Amo20g2642 134 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2642 Amo-Chr20 122740447 122741498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2642 1 134 AP2-EREBP Transcription Factor Family AT5G25190 47.101 4.45e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2642 - - aip:107621703 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2642 20 122740447 122741498 Amo20g2642 20 122740447 122741498 ECH
Amo10g2179 10 76635894 76636486 Amo20g2642 20 122740447 122741498 hybridization
Amo06g2822 06 93464158 93465293 Amo20g2642 20 122740447 122741498 PCT
Amo20g2642 20 122740447 122741498 Amo06g2822 06 93464158 93465293 PCT