Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2632 ATGAAGAAGCAAGGGTGTGAGGTTGAAGCAATAGGCATCAACTACAAGATTTGCACAGGCACAACAGAGCAAACTTTCAAGATCTTCAGAAAACCTCCACAACTGAATAATGAAGAACATGGAGAGGCACCAGAACCAGCAGAGGAAGCAAGAACTAATGATCACAGATCATTCTGCAGCAGAGTTAGGCATATTCTCTGGGATGTGAACTGCGTGGCGAAGCCGTCGGAAGTTCTGGCAGTTGTTGGTCCAAGTGGGGCTGGAAAATCATCCCTCCTTGAGATTCTTGCCGGCAAAGTTTGTCCGACAAAAGGGTCTATCTTGGTGAACAAGAAAACTGTAGATAAAGCACAGATCAGGAAGATTTCGGGGTATGTAACACAAAAAGATATCTTATTTCCATTACTTACGGTTGAAGAAACATTGATGTTTAGTGCAAAGTTAAGGCTGAATCTTCCTAAGCAACAACTATGCTCCAGAGTGAAGTCACTGATTCAGGAACTTGGTCTTGGCCATGTTGCTAGGACTAGAGTCGGAGATGAAAAGGTTCGGGGAATATCCGGTGGCGAGAAGCGCCGCGTTTCAATTGCCATAGAAGTAGTACATGATCCAAAAGTGCTGATTCTGGATGAACCAACTTCAGGCCTCGACAGTACTAGTGCAATGCAGATAATTGGTATGCTAAAAGTCATGTCCGAATCGAGGGGACGAACTATAATCTTCAGTATCCATCAACCTGGGTTCAGAATAGTGAAAATGTTCAATTCAATATTGTTGTTAGCCAATGGTTCTGTGTTGCACCATGGCACTGTGGATTTGCTAGGTGTGAATCTAAGGTTAATGGGTTTAGAGCTTCCTCTTCATGTTAACGTAGTTGAATTCGCCATTGAGTCTATTGATACCATTCAGCAGCAACAAAAATGTGAAGAAGATCAGCAGCAAGTGCCACAAAGATTGCGAGGAATTGCACCACGGAAGAAAGGCAATGATCGAGGCGAGAGTAGAAGTGGTAGGTTTACTCTGCAGCAGCTCTTTCAACAATCCAAGGTAACTGATGTTGGAATGATCAATGAGGAAATGGATTTCACTTGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATTATTCTCACTCATAGGTTTGCCAAAATCATTCTTCGCACGAAGGAGCTCTTCGCATGTAGGACAATTCAGATGCTGATTTCTGGGCTGGTTTTAGGCTCTGTCTTTTGTCATCTCAAGGATGGTCTAGAAGGAGCACAAGAAAGGGTTGGTCTATTTGCTTTCATACTAACATTTTTGTTATCATGCACCACAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAGGGAAACCTCTAGTGGAAGCTATAGAGTATCATCCTATGCTATTGCCAATGCCTTAGTTTTCTTGCCATTTCTACTCATTCTTGCCATTTTATTCACAATGCCCTTATATTGGCTCGTTGGCCTAAACAAGAACTTCGCAGCGTTCTTGAACTTCTTGTTGATAATTTGGCTAATTCTTTACACGGCGACTTCCGTGGTGGTGTGTTTCAGTGCTCTGGTGCCAAACTTCATTGTTGGGAATGCAGTGATTTCTGGTGTCATTGGTTCATTCTTTTTGTTCTCTGGTTACTTCATATCAAAAAATGAGATTCCTAAGTACTGGATTTTCATGCATTATGTGTCTCTATACAAGTATCCTTTTGAAGGCTTTCTAATAAATGAGTTCTCCAACTCAAAGAAATGCTTGGAATACATGTTTGGGGCATGTTTGGTAAAGGGAGAAGACGTGCTTAAAGAAAAAGGGTATGGCGGGGAAAATAGTAGATGGAAGAATCTTGGAATGATATTGTGCTTTATCTTAATCTACAGGTTAATTTCTTATGTATTTCTTAGATATAGATGCTCGAAGAGCATCATCATCTAA 1944 0.4115 MKKQGCEVEAIGINYKICTGTTEQTFKIFRKPPQLNNEEHGEAPEPAEEARTNDHRSFCSRVRHILWDVNCVAKPSEVLAVVGPSGAGKSSLLEILAGKVCPTKGSILVNKKTVDKAQIRKISGYVTQKDILFPLLTVEETLMFSAKLRLNLPKQQLCSRVKSLIQELGLGHVARTRVGDEKVRGISGGEKRRVSIAIEVVHDPKVLILDEPTSGLDSTSAMQIIGMLKVMSESRGRTIIFSIHQPGFRIVKMFNSILLLANGSVLHHGTVDLLGVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCEEDQQQVPQRLRGIAPRKKGNDRGESRSGRFTLQQLFQQSKVTDVGMINEEMDFTCEFANSRLRETIILTHRFAKIILRTKELFACRTIQMLISGLVLGSVFCHLKDGLEGAQERVGLFAFILTFLLSCTTEALPIFLQEREILMRETSSGSYRVSSYAIANALVFLPFLLILAILFTMPLYWLVGLNKNFAAFLNFLLIIWLILYTATSVVVCFSALVPNFIVGNAVISGVIGSFFLFSGYFISKNEIPKYWIFMHYVSLYKYPFEGFLINEFSNSKKCLEYMFGACLVKGEDVLKEKGYGGENSRWKNLGMILCFILIYRLISYVFLRYRCSKSIII* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2632 647 MobiDBLite consensus disorder prediction 313 335 - -
Amo20g2632 647 Pfam ABC transporter 68 214 IPR003439 GO:0005524
Amo20g2632 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 639 - -
Amo20g2632 647 MobiDBLite consensus disorder prediction 33 52 - -
Amo20g2632 647 Pfam ABC-2 type transporter 374 582 IPR013525 GO:0016020|GO:0140359
Amo20g2632 647 Gene3D - 54 322 IPR027417 -
Amo20g2632 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 273 IPR027417 -
Amo20g2632 647 SMART AAA_5 75 264 IPR003593 -
Amo20g2632 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 639 - -
Amo20g2632 647 MobiDBLite consensus disorder prediction 32 52 - -
Amo20g2632 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 287 IPR003439 GO:0005524
Amo20g2632 647 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2632 Amo-Chr20 122183396 122185425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2632 71 298 Calmodulin-binding Proteins AT2G36910 27.869 9.38e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2632 K05681 - gmx:121172640 953.355