Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2629 ATGGCTTTGGAAGCTTTAAAACCAAAATCAACAGTTGGAACTCCAGCATACATTGCTCCGGAGGTTCTGTCACGAAAGGAGTACGACGGAAAGATTGCAGATGTTTGGTCCTGTGGTGTGACCCTTTATGTCATGTTAGTTGGTGCATACCCTTTTGAGGATCCGGAAGATCCTAGAAATTTCAGGAAGACTATTGGGAGAATAATAGGTGTTCAATACTCCATACCAGACTATGTTCGCGTTTCTGCAGAGTGTAGGAACCTTCTCTCTCGAATCTTTGTTGCCGACCCTGCCAAGGCAAGTGGGTAA 309 0.4498 MALEALKPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPAKASG* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2629 102 Gene3D Transferase(Phosphotransferase) domain 1 2 100 - -
Amo20g2629 102 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2629 102 PANTHER SERINE/THREONINE KINASE 8 99 - -
Amo20g2629 102 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2F 8 99 - -
Amo20g2629 102 SUPERFAMILY Protein kinase-like (PK-like) 9 99 IPR011009 -
Amo20g2629 102 Pfam Protein kinase domain 8 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2629 Amo-Chr20 122054481 122055463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2629 13 99 CBL-interacting serine-threonine protein kinases AT5G10930 47.126 4.81e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo20g2629 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2629 K14498 - gmx:100817713 188.348