Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2595 ATGGGAGATAAAAACAATACAGATAATTATATAGTGTGTTACGCACCAACAATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTCTGGATTATTCTCTCCCTCTCTTCTTATTGCAGTTAACTTTGGTGGTTATCGCCACCCGAATATTCGTCTTCATCCTCAGGCCATTTCGCCAGCCACGCGTGATCGCCGAAGTCTTGGGTGGAGTAATGTTGGGTCCTTCAATGCTTGGGAGATATGAAACATTTGCCAATGCAGTGTTTCCTCTGAGAAGTGTTATGGTGATTGAAACAATGGCAAATGTTGGGCTTCTTTATTTTCTCTTCTTGGTAGGGGTGGAGATGGATGTAGGAATGTTGCGAACCACAGGGAAGAAGGTTGTGTCTCTTGCAGTTGCCGGCATGGTCTTGCCTTTTGTTATAGGAACCGCATTCTCCTACCTTTTGCATAGAGATTATGAACAAGGCATGACTCAAGGCACCTATATACTGTTCCTTGGTGTTGCTCTCTCTATCACTGCATTTCCTGTTCTTGCCCGTATACTCGCAGAGCTCAAACTCATTAACACCGAGTTAGGTAGGCTTGCACTTTCTTCAGCACTCATCAATGATGTGTGTGCTTGGATACTCTTAGCATTAGCCATAGCACTTGCAGAGAATGAAACAACAAACATTGCTTCCCTTTGGGTTCTGTTGTCAAGTGTAGCCTTTGTGGCCTTTTGTGCTTACGCCGTCCGGCCGGGAGCCATATGGATTGTCAAGAAAACCCCTGAAGGAGAATCATTCAGTGAGTTTCATATATCCCTCATACTTGCAGGGGTTATGATCTCGGGTTTCATCACAGATGCCATTGGAACTCATTCTGTTTTCGGCGCATTTGTGTTTGGTTTGGCAATCCCAAGTGGACCACTTGGTGTTGCTCTGGTGGACAAGCTTGAGGATTTTGTTTCAGGACTTTTGCTCCCTCTGTTTTTCGCCAGTAGTGGGCTAAAAACTAACTTAAGACTTGTCAGAGGATCATACACCTGGGCAATTCTCATTCTTGTCATTTTCTTGGCTTGCATTGGCAAGGTTATTGGAACTTTAATGGTTGCATTCTTTTATCAAATTCCAATACGCGAAGGGGCTGCCCTCGGCTTACTCATGAATTCAAAAGGCCTAGTTGAAATGATTGTGCTAAATGTTGGAAAGGAGCAGAAGGTTTTGGATGAAGAATCGTTTGCGATCATGGTTATCATAACTGTAGTAATGACTGCAATTATTGTGCCTTCTGTATCATTCCTTTACAAACCATCAAGAAGATCCGTAAATTACAAAAAAAGAACTATTCAAATAGCTAAATCAGATGCAGAGTTTAGAGTACTAGTGTGTGTTCATACCCCTCGGAATGTGCCAACTATGATCAACCTCCTTGAAGCTTCTAATCCAACAAAGAAGTCACCAATATGTGTCTATGTTCTCCATCTTGTTGAACTTAGCGGTCGCACTTCCGCAATGCTCATAGTTCACAACACAAGAAAGCAGGGTTATCCTGCACTTAACAAGACCGAAGCTCAATCCGACCACATAATCAATGCCTTTGAAAACTTTCAGCACCATGCTTCTTTTGTTTCTGTCCACCCCTTAACAGCAATCTCCCCCTATTCCACTATGCATGAAGATATATGCCATTTGGCAGAGGACAAACGCATTGCCTTCATAATCCTTCCTTTCCATAAGCAACAAACAGTTGATGGAGGGATGGAAGCCACAAACATGGCATTCCGCACCATCAACCAAAATGTACTAGCAAATGCACCATGCTCAGTGGGAATTCTAGTTGATAGAGGCTTAAACGGCTCTAATCGCTTGGCTGCGAATCAAGTATCTTATCATGTAGCCATACTATTTTTCGGAGGACCAGATGATAGAGAGGCTTTGTGTTATGGATGGAGAATGCTAGAGCATTCAAGAATATGCCTTACGATAGTGCGCTTTGTCCAAGGGAAACAAGTATCCGGCCATATTAGGAGGCCTAGCATAGGCACAAGCGAACCGAGTGTATTAACAGTGGAAACAGAGAAAGATATTCAAAGACAGCTTGATGAAAATCTTTTGCATGATTTTAGAATGAGATTTCAAGAAGACGTTTCAGTCGATTACTTTGAGAAAGTGGTGAACAACGGTGAGGAGACGGTGGCGGCTATAAGGACAATGGATGACATCCATGACCTCTTCATTGTTGGGAGAGGCCAAGGGATAATATCACCACTCACAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGATTGGAGCAATTGGGGACCTATTAGCATCCACAGATTTTGCAGCCACAGCTTCAGTGTTGGTGGTGCAACAATATATAGGACCAAGTTTACATGGAGAAGTGCGAGAAACACCAGATAGTACAGCACCTATGAACGAAGAATATTTCAATGAGATTAATAATCATGAACAACCACTAAACCCAAAGGGAAAATGTGTCTTCAACATGGAAAACTTGTAA 2514 0.428 MGDKNNTDNYIVCYAPTMITTNGIWQGDNPLDYSLPLFLLQLTLVVIATRIFVFILRPFRQPRVIAEVLGGVMLGPSMLGRYETFANAVFPLRSVMVIETMANVGLLYFLFLVGVEMDVGMLRTTGKKVVSLAVAGMVLPFVIGTAFSYLLHRDYEQGMTQGTYILFLGVALSITAFPVLARILAELKLINTELGRLALSSALINDVCAWILLALAIALAENETTNIASLWVLLSSVAFVAFCAYAVRPGAIWIVKKTPEGESFSEFHISLILAGVMISGFITDAIGTHSVFGAFVFGLAIPSGPLGVALVDKLEDFVSGLLLPLFFASSGLKTNLRLVRGSYTWAILILVIFLACIGKVIGTLMVAFFYQIPIREGAALGLLMNSKGLVEMIVLNVGKEQKVLDEESFAIMVIITVVMTAIIVPSVSFLYKPSRRSVNYKKRTIQIAKSDAEFRVLVCVHTPRNVPTMINLLEASNPTKKSPICVYVLHLVELSGRTSAMLIVHNTRKQGYPALNKTEAQSDHIINAFENFQHHASFVSVHPLTAISPYSTMHEDICHLAEDKRIAFIILPFHKQQTVDGGMEATNMAFRTINQNVLANAPCSVGILVDRGLNGSNRLAANQVSYHVAILFFGGPDDREALCYGWRMLEHSRICLTIVRFVQGKQVSGHIRRPSIGTSEPSVLTVETEKDIQRQLDENLLHDFRMRFQEDVSVDYFEKVVNNGEETVAAIRTMDDIHDLFIVGRGQGIISPLTAGLTDWSECPEIGAIGDLLASTDFAATASVLVVQQYIGPSLHGEVRETPDSTAPMNEEYFNEINNHEQPLNPKGKCVFNMENL* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2595 837 PANTHER CATION/H+ EXCHANGER 3 7 798 - -
Amo20g2595 837 Gene3D - 37 440 IPR038770 -
Amo20g2595 837 PANTHER CATION/H + ANTIPORTER 7 798 - -
Amo20g2595 837 Pfam Sodium/hydrogen exchanger family 45 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2595 Amo-Chr20 121474853 121477726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2595 3 811 Antiporter Super Family AT2G13620 68.850 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2595 - - gmx:100818927 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2595 20 121474853 121477726 Amo20g2595 20 121474853 121477726 ECH