Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2582 ATGATAGAGTTTGTGGATTTGAAAACTACTTATGACTTCTATAACGAGTACAGTCGAATTAAGGGGTTTTCGATAAGGCGGTCGAAGGTAGGGCACTGCAAGAAGGCAAGATCTGAGGGAGACGTTATATGGCAAATTTTTATGTGCTCACGACAAGGTGAACGAGATGCAAAGCATGTTCATAGAACTAATAGGAAGATGGATCCTAGACCAATAAACGCGATGCGGGTGAATGGGCGATGGTACGTGGAGTTCTTCTCCGATAAACATAACCATAACATGTTGGAGGAAAGGTTTAGGGGAATGATGCGGTCTCAATAG 321 0.4299 MIEFVDLKTTYDFYNEYSRIKGFSIRRSKVGHCKKARSEGDVIWQIFMCSRQGERDAKHVHRTNRKMDPRPINAMRVNGRWYVEFFSDKHNHNMLEERFRGMMRSQ* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2582 106 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 97 - -
Amo20g2582 106 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 97 - -
Amo20g2582 106 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2582 Amo-Chr20 120872168 120872522 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g2582 FAR1 3.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2582 - - ahf:112772626 183.726