Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2560 ATGGAGATGAAGATGAATGGGATTACTACCACCACTTGTGAGTCTCAAAACAAAGCGAGGCTTGCAATTCTGGAACTAGCACACATGATGAGTGTCCCAATGTCCCTCGTCGCCGTCATCAATCTGAAGGTCCCCCAAGCCATATGGCAAGGCGGTTCCAACGCTCCCATCTCCGCCTCTCAAATTCTCGCCCGCGGTGGTGCCGCCTATGACGCTGAGAACCTTCAGCGCATTCTCCGCTTGCTGGCCAGCTATAACATATTCATGGAGCACCTTAACAGCAGCGGTGAAAGGAAGTACTCCCTCACTGACATTGGCAAAACTCTCATTGATGATGCTGAAGGTTTGTCCTATGCATATTACATGCTCCAGCACCATCAGGATGCATTGATGCGAGCATGGCCGTTGATGGAGGAGACAGTGAAGGATCCAACAGTGGAGCCATTCAAGAAAGCAAACGGAGAGGGTGCAATTTCATATTATACAAAGAGACCAGATGTGTTGAAATTGGCTGTTAAATCCTTATCTGGAATGTCCATACCTTTAATGAAGGATATCTTGGATTCCTATGATGGCTTCCAAGGTGTGGACACATTGGTTGATGTTGGTGGCAACAATGGTATCTCTTTACGCTCGATCATGGAAAAATACCCAAATGTGCGTAAGGGCATCAACTTTGATCTTCCAGATATGGTGGCCAATGCACCACAGATTCCAGGTGTAACTCATGTGGGTGGCGACGCGTTTGAATCTGTTCCTAGTGGAGATGCCATCTTCATAAAGTGGGTCCTGTTAGCATGGACAGATGAGGAATGCAAGAAAGTTTTCCAGAATTGCTATAAGGCGCTTCCAGCGAACGGAAAAGTGATCGCTTGCGAGCCGGTGGCGCCGGAGATGACGGATGACAGCCAGAGAACAAGAGCATTGCTTGCTGGTGACATATTCATAATGACAATGTATAGAACCAAGGGGAAGCACAGGACTGAACAACAATTCAAAGAGCTTGCTACTTCTGCTGGATTTTCTCACTTTCGTGCTTTCTATATTGATCCTTACATGGCTGTGCTTGAATTTCACAAATGA 1083 0.4681 MEMKMNGITTTTCESQNKARLAILELAHMMSVPMSLVAVINLKVPQAIWQGGSNAPISASQILARGGAAYDAENLQRILRLLASYNIFMEHLNSSGERKYSLTDIGKTLIDDAEGLSYAYYMLQHHQDALMRAWPLMEETVKDPTVEPFKKANGEGAISYYTKRPDVLKLAVKSLSGMSIPLMKDILDSYDGFQGVDTLVDVGGNNGISLRSIMEKYPNVRKGINFDLPDMVANAPQIPGVTHVGGDAFESVPSGDAIFIKWVLLAWTDEECKKVFQNCYKALPANGKVIACEPVAPEMTDDSQRTRALLAGDIFIMTMYRTKGKHRTEQQFKELATSAGFSHFRAFYIDPYMAVLEFHK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2560 360 PANTHER O-METHYLTRANSFERASE 11 359 IPR016461 GO:0008168
Amo20g2560 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Amo20g2560 360 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Amo20g2560 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 360 IPR016461 GO:0008168
Amo20g2560 360 Gene3D - 6 114 IPR036388 -
Amo20g2560 360 SUPERFAMILY "Winged helix" DNA-binding domain 16 112 IPR036390 -
Amo20g2560 360 Gene3D Vaccinia Virus protein VP39 115 360 IPR029063 -
Amo20g2560 360 PANTHER OS02G0823400 PROTEIN 11 359 - -
Amo20g2560 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2560 Amo-Chr20 120087104 120094292 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2560 12 360 Monolignol Biosynthesis Gene Families AT3G53140 62.570 1.63e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2560 - - ccaj:109819366 516.538