Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2551 ATGGAGATGAAGATGAATGGGATTACTACCACCACTTGTGAGTCTCAAAACAAAGCGAGGCTTGCAATTCTGGAACTTGCACACATGATGAGTGTCCCAATGTCCCTCGTCGCCGTCATCAATCTCAAGGTCCCCCAAGCCATATGGCAAGGCGGTTCCAACGCTCCCATCTCCGCCTCTCAAATTCTCGCCCGCGGTGGTGCCGCCTATGACGCTGAGAACCTTCAGCGCATTCTCCGCTTGCTGGCCAGCTATAACATATTCCTGGAACACCTTAATAGCAGCGGTGAAAGGAAGTATTCACTCACTGATATTGGCAAAACTCTCATTGATGATGCTGAAGGTTTGTCCTATGCATATTACATGCTCCAGCACCATCAGGATGCATTGATGCGAGCATGGCCATTGATGGAGGAGACAGTGAAGGATCCAACAGTGGAGCCATTCAAGAAAGCAAACGGAGAGGGTGCAATTTCATATTATACAAAGAGACCAGATGTATTGAAATTGGCTGTTAAATCCTTATGTGGAATGTCCATACCTTTAATGAAGGACATCTTGGATTCCTATGATGGCTTCCAAGGTGTGGACACATTGGTTGATGTTGGTGGCAACAATGGTATCTCTTTACGCTCGATCATGGAAAAATACCCAAATGTGCGTAAGGGCATCAACTTTGATCTTCCAGATATGGTGGCCAATGCACCACAGATTCCAGGTGTAACTCATGTGGGTGGCGACGCGTTTGAATCTGTTCCTAGTGGAGATGCCATCTTCATAAAGTGGGTCCTGTTAGCATGGACAGATGAGGAATGCAAGAAAGTTTTCCAGAATTGCTATAAGGCGCTTCCAGCGAACGGAAAAGTGATCGCTTGCGAGCCGGTGGCGCCGGAGATGACGGATGACAGCCAGAGAACAAGAGCATTGCTTGCTGGTGACATATTCATAATGACAATGTATAGAACCAAGGGGAAGCACAGGACTGAACAACAATTCAAAGAGCTTGCTACTTCTGCTGGATTTTCTCACTTTCGTGCTTTCTATATTGATCCTTACATGGCTTTGCCAAATGGTGGTGTTACGAAACCAGAGTCTCAAAGTAAAGAAAGGCTCGCAATTTTCGAATTGGCACACATGATTAGTGTTCCTATGTCACTGGTAGCCATAATCAAACTGAAAGTCCCTCAAACCATTTGGCAACAAGGTTCCAACACTCCTCTCTCCGCTTCGGAAATTATCACACGTGTGCATCCCCATGGTAGCGCTGATCCACACAATCTTCAACGCATGCTTCGCTTGCTCACAAGCTTTAACATCTTTTTTGAGCATCTCAACCCAAATGGTGAGAGGAAGTATACCCTAACTGACATTGGTAAAACCCTTGTTGATGATGATGAAGGTCTATCCTATGCCTATTACATGCTCCAGCATCATGAGGATGCTTTGATAAATACTTGGCCATTCGTGGCGGAGGCAGTGGAGGATCCAACAACGGTGCCGTTCAAGAAGGCTAACGGCGACGGAGCGATGAGCTACTACTCAAAAAGGCCGAATATGATAAACTTGTTTGGCAAGGCTATGCGTAGTGTGTCCGTACCATTCATGAGGGAAATGCTAGAGAACTATGATGGATTCAATGGTGTTGAATCATTGGTTGATGTTGGTGGCAACTATGGTGACTGTTTAGAAATGATTATGCAAAGGTACCCTAATATCCGTAAGGGCATCAACTTCGATTTGCCCCATGTCGTTGCTCATGCACCACCTCTTCCAGGTGGTGACGCCCATGAATTTGTTCCCAATGGAGATGCTATATTCTTAAAGTGGCTAGTTACAACATCGACGGACGAGGATACCAGGAAGGTGTTTGAGAATTGTTACAAGGCACTTCCAAATGGAGGGAAATTGATTGTTGTTGAGCCCGTGCTGCCAGAGTCAACGGATGAAAGTCAAAGAACAAGGACATTGCTTGGTGCTGACGTGTACAACATGACTATGTACAATCCTAAGGGGAAGCAGAGAACCGAACAACAATTCAAAGATCTTGCCAATTTTGCTGGCTTCTCTTCTTGCCGTGCCTTCTATGTTGATCCTTTCATGTCTCTTCTTGAGTTTCAGAAATGA 2124 0.4557 MEMKMNGITTTTCESQNKARLAILELAHMMSVPMSLVAVINLKVPQAIWQGGSNAPISASQILARGGAAYDAENLQRILRLLASYNIFLEHLNSSGERKYSLTDIGKTLIDDAEGLSYAYYMLQHHQDALMRAWPLMEETVKDPTVEPFKKANGEGAISYYTKRPDVLKLAVKSLCGMSIPLMKDILDSYDGFQGVDTLVDVGGNNGISLRSIMEKYPNVRKGINFDLPDMVANAPQIPGVTHVGGDAFESVPSGDAIFIKWVLLAWTDEECKKVFQNCYKALPANGKVIACEPVAPEMTDDSQRTRALLAGDIFIMTMYRTKGKHRTEQQFKELATSAGFSHFRAFYIDPYMALPNGGVTKPESQSKERLAIFELAHMISVPMSLVAIIKLKVPQTIWQQGSNTPLSASEIITRVHPHGSADPHNLQRMLRLLTSFNIFFEHLNPNGERKYTLTDIGKTLVDDDEGLSYAYYMLQHHEDALINTWPFVAEAVEDPTTVPFKKANGDGAMSYYSKRPNMINLFGKAMRSVSVPFMREMLENYDGFNGVESLVDVGGNYGDCLEMIMQRYPNIRKGINFDLPHVVAHAPPLPGGDAHEFVPNGDAIFLKWLVTTSTDEDTRKVFENCYKALPNGGKLIVVEPVLPESTDESQRTRTLLGADVYNMTMYNPKGKQRTEQQFKDLANFAGFSSCRAFYVDPFMSLLEFQK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2551 707 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 467 705 IPR029063 -
Amo20g2551 707 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 374 707 IPR016461 GO:0008168
Amo20g2551 707 PANTHER OS02G0823400 PROTEIN 363 706 - -
Amo20g2551 707 Gene3D - 6 114 IPR036388 -
Amo20g2551 707 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 360 IPR016461 GO:0008168
Amo20g2551 707 SUPERFAMILY "Winged helix" DNA-binding domain 367 464 IPR036390 -
Amo20g2551 707 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 351 IPR029063 -
Amo20g2551 707 Gene3D Vaccinia Virus protein VP39 115 355 IPR029063 -
Amo20g2551 707 Gene3D Vaccinia Virus protein VP39 462 707 IPR029063 -
Amo20g2551 707 PANTHER O-METHYLTRANSFERASE 363 706 IPR016461 GO:0008168
Amo20g2551 707 SUPERFAMILY "Winged helix" DNA-binding domain 16 112 IPR036390 -
Amo20g2551 707 Pfam Dimerisation domain 384 435 IPR012967 GO:0046983
Amo20g2551 707 Gene3D - 359 461 IPR036388 -
Amo20g2551 707 PANTHER OS02G0823400 PROTEIN 11 351 - -
Amo20g2551 707 Pfam O-methyltransferase domain 137 342 IPR001077 GO:0008171
Amo20g2551 707 Pfam O-methyltransferase domain 489 689 IPR001077 GO:0008171
Amo20g2551 707 PANTHER O-METHYLTRANSFERASE 11 351 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2551 Amo-Chr20 119856744 119868471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2551 364 707 Monolignol Biosynthesis Gene Families AT3G53140 56.374 4.92e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2551 - - ccaj:109819366 503.056