Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2527 ATGGGTTTTGTTGCATCAAGCGATTTCGATGTGAAACTTGAGAAACAAGAAGAAGATGGCTTCTTGATTGCAAAAATGGCATGTTCAYTTGTGGTTCCAATGGCTGTGAGGACCACAATSGAGCTTGGTGTATTTGACATCATGGCCAAAGCAGGCGAAGGTGCAAAGCTTTCAGCAAAAGACATTGTGGACCACATTGGAGCCAACAACCCTGAAGCAGCATCAATGTTGGATCGTCTTCTTAGGCTTCTTGCAAGTCACTCATTACTGCGTTGTTCTGTTGTTGAAGATCCACAAAACCCTAATAACTTGCATCACAGGCTGTATAGCCTCGCACCTTGTTCCAAATGTTTTGTGAGTGATGCTCATGGTGTGTCTTTGGGACCCTCATTGTTGCTGTCTCTCGATAAAGTCTTCTACGAAAGCTGGAATGAATTGAAAGGAGCTATCCTTGAAGGAGGAACACCGTTCAATAGGGCTCATGGCATGCATGTCTTCGAGTATGCAAAGGTTGATGGTAGGTTCAACAAGGTTTTCAACAAAGCAATGCATAACTCCTCCACTGTATTAATGAAGAGGATTCTTGATGTCTATAAAGGCTTTGACCACATCAATAAACTAGTGGATGTTGGTGGTGGGGTTGGGGCAGTTATCAAATTGATCACTTCCAAACACCCTCATATCCATGGTATCAATTTTGATTTGCCTCATGTCATAGAATGTGCCTCAGCCTATGATGATGGTGTGGAGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCAAATGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGGGCAATGATGATTGCTTGAAGATATTAAAGAATTGTTACAAGGCTATTCCCAACGATGGAAAGGTGATTGTGATGGACACAATTCTTCCTACTGTTCCTGAGGACACATCTTCTGCCAAGAACGCTTTTAGAAATGATGTTATCATGATGACTCAAATGCCCGGAGGATTTGAGAGAACCCAACAAGATTTCATGAACTTGGCAAATGGATCTGGATTTAGTGGCATAAAATTTGTGTGTTGTGTCTCTAGCTTCTGGGTCATGGAGTTCTACAAGTAA 1104 0.4212 MGFVASSDFDVKLEKQEEDGFLIAKMACSXVVPMAVRTTXELGVFDIMAKAGEGAKLSAKDIVDHIGANNPEAASMLDRLLRLLASHSLLRCSVVEDPQNPNNLHHRLYSLAPCSKCFVSDAHGVSLGPSLLLSLDKVFYESWNELKGAILEGGTPFNRAHGMHVFEYAKVDGRFNKVFNKAMHNSSTVLMKRILDVYKGFDHINKLVDVGGGVGAVIKLITSKHPHIHGINFDLPHVIECASAYDDGVEHVGGDMFESVPNGDAIFMKWILHDWGNDDCLKILKNCYKAIPNDGKVIVMDTILPTVPEDTSSAKNAFRNDVIMMTQMPGGFERTQQDFMNLANGSGFSGIKFVCCVSSFWVMEFYK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2527 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Amo20g2527 367 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Amo20g2527 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 367 - -
Amo20g2527 367 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Amo20g2527 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 367 IPR016461 GO:0008168
Amo20g2527 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 366 IPR029063 -
Amo20g2527 367 Gene3D - 5 117 IPR036388 -
Amo20g2527 367 Gene3D Vaccinia Virus protein VP39 120 367 IPR029063 -
Amo20g2527 367 Pfam O-methyltransferase domain 143 349 IPR001077 GO:0008171
Amo20g2527 367 PANTHER O-METHYLTRANSFERASE 14 367 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2527 Amo-Chr20 118856664 118859417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2527 1 367 Monolignol Biosynthesis Gene Families AT5G54160 48.229 1.20e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2527 K13066 - gmx:100789402 449.899