Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2514 ATGGAAGAAGAAGAAGAAGAAGAGAGCGAATCGGTAAGAGTAAAGGACATCCTTCTGAAGCGGAAGATCGGAAAGGGGTCGTTCTCGGCGGTGTGGAGGGCGGAGCAAAGAGGCACCGGCGAAGAGGTGGCAGTGAAACAGGTCTTCCTCTCCAAACTCAGCCCTCGCCTTAAGTCATCGTTCCACTGCGAGCTCAATTTCTTGTCCTCCGTCAACCACCCCAACATCGTTCGCCTCCTTGATTTCTTCCAGTATGATGGATGTGCGTACTTGGTGATGGAGTTCTGTGCTGGAGGGAACCTTGCTTCTTATATCCGATTCCATGGGAGAGTTCAACAACAAACTGCCAGAAGATTCATGCAGCAGCTTGGTTCTGGTATGAAAATATTACAAAGTCATGGTATCATTCATAGAGATTTGAAACCAGAGAACATTTTGCTATCAAAACCCGGAGATGATGCGATTCTAAAGATTGCAGACTTTGGTCTCTCAAGAACTGTACGTCCTGGCGAGTATGCGGAGACAGTCTGTGGTACGCCATTATACATGGCACCGGAAGTTCTTCAGTTCCAGAAATATGATAGCAAGGCAGATATGTGGAGTATTGGGGTTATTCTTTTCGAGCTTCTAAACGGCTACCCTCCTTTTAATGGCAGAAATAATGTTCAGCTGTTAAAGAATATCAGATCATCTACCGGCTTGCCATTTTCTCAGATCATTCCTTTGGGATTGGATCCTGATTGTCTTGATGTTTGTTCAAAACTACTATGCTCAAATCCAGTGGATCGCCTATCTTTCGATGAATTTTATCAGCATAGGTTTCTACGAAGAAAAGTGATGGGAGCTTGA 849 0.4499 MEEEEEEESESVRVKDILLKRKIGKGSFSAVWRAEQRGTGEEVAVKQVFLSKLSPRLKSSFHCELNFLSSVNHPNIVRLLDFFQYDGCAYLVMEFCAGGNLASYIRFHGRVQQQTARRFMQQLGSGMKILQSHGIIHRDLKPENILLSKPGDDAILKIADFGLSRTVRPGEYAETVCGTPLYMAPEVLQFQKYDSKADMWSIGVILFELLNGYPPFNGRNNVQLLKNIRSSTGLPFSQIIPLGLDPDCLDVCSKLLCSNPVDRLSFDEFYQHRFLRRKVMGA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2514 282 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Amo20g2514 282 SMART serkin_6 17 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2514 282 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 271 IPR045269 GO:0004674|GO:0006914
Amo20g2514 282 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 6 271 - -
Amo20g2514 282 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2514 282 ProSiteProfiles Protein kinase domain profile. 17 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2514 282 Gene3D Transferase(Phosphotransferase) domain 1 8 281 - -
Amo20g2514 282 SUPERFAMILY Protein kinase-like (PK-like) 13 277 IPR011009 -
Amo20g2514 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2514 Amo-Chr20 117729440 117731095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2514 19 277 CBL-interacting serine-threonine protein kinases AT2G30360 37.358 8.84e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Amo20g2514 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2514 - - lja:Lj1g3v1289070.2 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2514 20 117729440 117731095 Amo20g2514 20 117729440 117731095 ECH