Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2505 ATGGCTGCCATGAACTCCTCTAGTGTATTGGCTTGTAGCTACGCCATTTCGGGTGGCGCTTCCAGTTCCGAGCTCAGTGGCAAGATTACTTCCTTGCCCTCTGTCTCCACCAAGTTGCCTGTGATAAAGGTGAAGGCCCAGCAAGAGAGAGCCCCCAAAGCCATGAAAGAATCTGAATTGGGAACAAGAAGAACCGCTCTTGTTTACTTGGCAGCCACACTTTTTGGCACTGCAGCTGCTGCTTCTTCTGCCAATGCTGGTGTCATTGAAGATTACCTTGAGAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCTACTAGTGGAGCAAATTTTGCAAGAGCATACACGGTGCAATTTGGCACTTGCAAATTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCCTTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 516 0.4632 MAAMNSSSVLACSYAISGGASSSELSGKITSLPSVSTKLPVIKVKAQQERAPKAMKESELGTRRTALVYLAATLFGTAAAASSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2505 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522|GO:0015979
Amo20g2505 171 Gene3D - 87 171 IPR044907 -
Amo20g2505 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2505 Amo-Chr20 117328676 117330442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2505 1 142 Calmodulin-binding Proteins AT5G64040 61.589 3.21e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2505 K02701 - pop:7466843 242.662