Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2490 ATGAAACGACAGAGAGCCTATGCGGTTGTGTTTGTAATACAAGCCATATATGCTGCCATGTTCCTTCTATCAAAAGCAGCATTCGATCATGGCATGAACAATTTCGTCTTTGTCTTTTACAGACAGGCCATTGCAACCCTTTTTCTCATCCCTTTTGCTCTCTTCTTCGAATGGAAAACTGCGCCGCCTTTGCCTTTCGTCACCTTCTGCAAGATCTTCCTCCTTTCATTCTGTGGCATTACTTTGAGCTTGGATGTATATGGTATTGGTCTTATATACACGTCAGCAACGTTGGCTGCTGCTACCACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCGCTCTTACTCGGGATTGAAAGCTTGAAAATAAAGACAGCAGCGGGGATTGCTAAGCTGATAGGCATTGGTGCATGCTTGGTTGGTGCAGCAATTCTTGCCTTTTACAAGGGTCCTCATTTGGAATTTCTAAGCCACTATCACATTCTAAATTACCATAAAACCCAACAACACCAAGGTCATGCTCAATCTCATACATGGATAAAGGGCTGCTTCTTCATGCTCCTCTCCAATACCTTTTGGGGGATGTGGCTTGTGCTACAGGCTTTTGTCATAAAAGGTTATCCTTCCAAGCTTCTTTTCACAACTCTTCAGTGTTTCTTAAGTTCAATTCAATCTTTTGTCATTGCCTTGGCCGTAGAAAGGAACATCGACGAATGGAAACTGGGTTGGAATCTCAGGCTCCTATCCGTAGTATACTGTGGGGTTATGGTGACCGGTGTCACATATTACTTGCAGACATGGGTTATAGAAAAGAAAGGACCTGTGTTTCTAGCAATGTCAACACCACTTAACCTCATTATCACAATCTTCGCCTCTGCAATTATCTTGGGCGAGATAACCACTTTGGGGAGCCTTTTAGGAGGGTTGGCATTGGTTGTAGGACTGTACAGTGTGCTGTGGGGAAAAAGCAGGGAGCAAATGCCCAAAGCCTCACAAGACTTGGAGCAAACATCGGTTTAA 1023 0.4389 MKRQRAYAVVFVIQAIYAAMFLLSKAAFDHGMNNFVFVFYRQAIATLFLIPFALFFEWKTAPPLPFVTFCKIFLLSFCGITLSLDVYGIGLIYTSATLAAATTNCLPVITFFLALLLGIESLKIKTAAGIAKLIGIGACLVGAAILAFYKGPHLEFLSHYHILNYHKTQQHQGHAQSHTWIKGCFFMLLSNTFWGMWLVLQAFVIKGYPSKLLFTTLQCFLSSIQSFVIALAVERNIDEWKLGWNLRLLSVVYCGVMVTGVTYYLQTWVIEKKGPVFLAMSTPLNLIITIFASAIILGEITTLGSLLGGLALVVGLYSVLWGKSREQMPKASQDLEQTSV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2490 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Amo20g2490 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Amo20g2490 340 PANTHER WAT1-RELATED PROTEIN 7 328 - -
Amo20g2490 340 Pfam EamA-like transporter family 7 141 IPR000620 GO:0016020|GO:0016021
Amo20g2490 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Amo20g2490 340 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2490 Amo-Chr20 116270156 116275001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2490 1 254 Nodulin-like Gene Family AT5G64700 60.853 4.35e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2490 - - gmx:100804562 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2490 20 116270156 116275001 Amo20g2490 20 116270156 116275001 ECH