Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2486 ATGGAGCTTCATATTTCAGATTTTGGTACTGCCAACATCAGGAACCTAGCTGAGGATTCTTATACTCATTCTGATTTCCCTTGGCAAAAGCTTTCAGCACGTATAGCTGGTACTACTGGCTATATGGCACTAGAGTGTGCATATGCAACAGTGCCAAGCAGAACTTTTGACGTATATAGCTATGGAGTAGTGTTGCTTGAGCTAATAACCGGAAAAAGAGCATTAGTTTATGAAAATAAACATATAGTGAGTTGGGTTAGATCTGTCTCGGATGATAAAACAAACAAAATTGACAAGATTGTTGTTTCATACCTTGCAGCTTCATTTCCCAATTCAGCAGTGTTGGAAAGCCAAAGGTGTGATCATATAGATAATGATAATAATGATAGTGCTGAAGTTGCTGTAGATGTAGCACCACAATCACCATTCAATAATGAACCAGATATTAGTACTAATCCAGTTTTCAACACTCAGGGTGAGGGAGACTCCTATCACCTATCAAGGACTGATGGTCTTGATTGCATAACACTGGATGATTGGTGTGGAAATGCTTTACATGGCTTCTTTTTTCTGGGCTAC 579 0.3903 MELHISDFGTANIRNLAEDSYTHSDFPWQKLSARIAGTTGYMALECAYATVPSRTFDVYSYGVVLLELITGKRALVYENKHIVSWVRSVSDDKTNKIDKIVVSYLAASFPNSAVLESQRCDHIDNDNNDSAEVAVDVAPQSPFNNEPDISTNPVFNTQGEGDSYHLSRTDGLDCITLDDWCGNALHGFFFLGY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2486 193 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g2486 193 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Amo20g2486 193 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 116 - -
Amo20g2486 193 PANTHER OS08G0446200 PROTEIN 1 116 - -
Amo20g2486 193 SUPERFAMILY Protein kinase-like (PK-like) 2 80 IPR011009 -
Amo20g2486 193 Pfam Protein tyrosine and serine/threonine kinase 4 75 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2486 Amo-Chr20 116068809 116070202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2486 1 89 Receptor kinase-like Gene Family AT1G17750 55.435 4.00e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo20g2486 PK_Tyr_Ser-Thr 7.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2486 - - aip:110268450 334.724