Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2468 ATGAAGCTTGCATATTTTCAAGATCAACACATGAAACTTTTGCTCAAAAGCTGTATTAGACCTTCAAAAAACCATAAAAGGTTTAGCAAGCCCAAGTTATCACTTAGTGACTTCATAATTTGTCATTATGCCGGTGATGTCATTTATCAAACTGAATTATTCTTCGACAAGAACAAAGATTATGCTGTAGCTAAACACCAAGCACTTCTTTATGCTTCTAAATAG 225 0.3333 MKLAYFQDQHMKLLLKSCIRPSKNHKRFSKPKLSLSDFIICHYAGDVIYQTELFFDKNKDYAVAKHQALLYASK* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2468 74 Gene3D - 3 74 - -
Amo20g2468 74 ProSiteProfiles Myosin motor domain profile. 1 74 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo20g2468 74 Pfam Myosin head (motor domain) 15 73 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo20g2468 74 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 74 IPR027417 -
Amo20g2468 74 PANTHER MYOSIN-7 23 74 - -
Amo20g2468 74 PANTHER MYOSIN 23 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2468 Amo-Chr20 115588854 115589431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2468 23 73 Myosins gene family AT1G04160 80.392 3.56e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2468 K10357 - gmx:100819463 98.9821