Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2450 ATGCAAGTCAAGGTCAAGAAGGAGATGGGATCTGTCCAGGATATCAAGTATTGGAGAATGGGTACAATTAATCCAAATCTTGTGTTCGCTGCAAGGCCTGGCTATGGCCACCTTGGAACAAAATGTGTCGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCAGCCGTTACACTGTTAAGATAATACCTGAAGTGAGGTGTTGCAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGAGTTCGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATATTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGATTGAAGATGATGAGAGTATTGGTACTACCAGTTGTGCCAAGGCTAATTCCACTCCATCGAAAAAGCTAAAGCCAAAGCCATCACCAGCACAAGCTCTTGGCACCCCAGCCAAGAGAAAGTCTCTAGCTATGATGTCTCCTTCAAGCAGCATCAACAGGCTAAAACCTGTTTAA 537 0.432 MQVKVKKEMGSVQDIKYWRMGTINPNLVFAARPGYGHLGTKCVVKANHFLADISASDLSRYTVKIIPEVRCCKTSKAIIAELVRVHKNTEFGMRLPVYDGGRNIYTAAMLPFTYKEFTILLIEDDESIGTTSCAKANSTPSKKLKPKPSPAQALGTPAKRKSLAMMSPSSSINRLKPV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2450 178 PANTHER PROTEIN ARGONAUTE 10 20 129 - -
Amo20g2450 178 Pfam N-terminal domain of argonaute 40 135 IPR032474 -
Amo20g2450 178 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 20 129 - -
Amo20g2450 178 MobiDBLite consensus disorder prediction 133 178 - -
Amo20g2450 178 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2450 Amo-Chr20 114532567 114534314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2450 10 128 Eukaryotic Initiation Factors Gene Family AT5G43810 48.739 2.48e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2450 K11593 - ahf:112784635 219.164