Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2436 ATGCTATCAAATTCCAATGCACAGAACAATGCCATAACTCAATCTTCTGGAAAGGCTGCTGTGTWAATGGCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGCAGAAGCTGATGCTCCAAAACTGAGAAACAATCAACCTGCCCCAGGAGCTGTCAACCCTCCTACTATAATGGGACGTGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAACGTGACCTGAAGAGACAGAAAAGAAAACAGTCTAACAGAGAATCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGCGAGGACTTGCAAAAGAAGGTGGAACTGGGAAACGAGAGCCAGACTCTGAGAGAAGAACTTCAGAGAGTATYAGAAGAATGCGAGAAGCTTACAGCTGAAAATAATTCCATCAAGGAAAAGTTGGAAAGGTTATGTGGACCAGAAGCAGTTGCCAACCTCGAATAA 477 0.4403 MLSNSNAQNNAITQSSGKAAVXMAATNLNIGMDLWNASSAEADAPKLRNNQPAPGAVNPPTIMGREVALGEQWIQDERDLKRQKRKQSNRESARRSRLRKQAECEDLQKKVELGNESQTLREELQRVXEECEKLTAENNSIKEKLERLCGPEAVANLE* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2436 158 SUPERFAMILY Leucine zipper domain 81 132 IPR046347 GO:0003700|GO:0006355
Amo20g2436 158 PANTHER G-BOX-BINDING FACTOR 3-RELATED 3 158 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo20g2436 158 SMART brlzneu 77 140 IPR004827 GO:0003700|GO:0006355
Amo20g2436 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Amo20g2436 158 MobiDBLite consensus disorder prediction 43 100 - -
Amo20g2436 158 CDD bZIP_plant_GBF1 82 131 IPR045314 GO:0003700|GO:0006355
Amo20g2436 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 141 IPR004827 GO:0003700|GO:0006355
Amo20g2436 158 PANTHER G-BOX-BINDING FACTOR 1 3 158 - -
Amo20g2436 158 Gene3D - 80 150 - -
Amo20g2436 158 Pfam bZIP transcription factor 77 138 IPR004827 GO:0003700|GO:0006355
Amo20g2436 158 Coils Coil 90 127 - -
Amo20g2436 158 MobiDBLite consensus disorder prediction 71 86 - -
Amo20g2436 158 Coils Coil 129 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2436 Amo-Chr20 114141184 114142483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2436 1 158 bZIP Transcription Factor Family AT4G36730 50.000 2.06e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo20g2436 bZIP_1 3.7e-16 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2436 K09060 - gmx:547788 224.942