Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2409 ATGAGAAAAAGATATGTTTTTAAAGAAGCGGTTGCTCCATGGGACAAAGAAGTTATATCTGACCCCAGTACTCCAAAGCCTAACCCACAACCATTCTTTTATGCACATGAAGGAAAGTCTGATCATAACTTTGAAATGCAAGATGGGGTTATTCACGTATATCCAAATAACGATTATCTATACTGCAGCTATATCAGCAAAAAACTGGAAATGCTGACTCCTGTTTTACATCTTGGAGCTGGAGCATGTGCTAGAATAATTGCCATGTCTGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACATGTGGCTAGCTTTCCATTTGATGATCATAATTGCCCACCACTTCAACTGGTTATCTCTTTCTGTCATAGTACATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCGACTTGTTCTGCCCAGTCAGATTGGAAACTGTGAAACATTTTGGTCTTGGTCCTGATGTTCCTCACAGCCATACCAAGCCTTGTGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGAAAGAACAACAAAGGACTTAGTGTTTAA 582 0.4021 MRKRYVFKEAVAPWDKEVISDPSTPKPNPQPFFYAHEGKSDHNFEMQDGVIHVYPNNDYLYCSYISKKLEMLTPVLHLGAGACARIIAMSATYPMDMVRGRITVHVASFPFDDHNCPPLQLVISFCHSTYSWLKLDIENVVVVDLFCPVRLETVKHFGLGPDVPHSHTKPCVRSKGRKFERARGRKNNKGLSV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2409 193 Pfam Ribosomal protein 60S L18 and 50S L18e 152 190 IPR021131 -
Amo20g2409 193 PANTHER AMP DEAMINASE 1 59 IPR006329 GO:0003876|GO:0032264
Amo20g2409 193 PANTHER AMP DEAMINASE 1 59 - -
Amo20g2409 193 Gene3D - 1 78 - -
Amo20g2409 193 Gene3D - 138 192 - -
Amo20g2409 193 SUPERFAMILY Mitochondrial carrier 67 108 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2409 Amo-Chr20 112490205 112492709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2409 93 143 Protein tyrosine phosphatase (PTP) family AT3G19420 66.667 1.11e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2409 K01490 - adu:110278182 135.576