Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2382 ATGAGCTGCTCACTTAGATTGCTTCATCTGTGTAAAAAGTCTCCAAATTTTCAAAATATTTGTGCCCAAGAAATTCTCATATGCTCGTCTTGTACAAATGAAGTATTACTTCCTGATGGCACACATATAGATAAGGTGCTTGTTCATGATAAGAAGAGCTTGTGTATGAAGTCAGACATGAAGATCACCTTGGTATTTGATGTTTTAGAAGAGGATTCTAATGAATTTGCTGATATGGATCTTCGACCATATTTTAGTTCTAGGCTTATTAATTTCTCCAATATGCATCCTGAGGTAACTTTTTTAATCTTAAGTTGTTATCATGTTAGTTATGTTTTTTCTTTGTAG 348 0.3305 MSCSLRLLHLCKKSPNFQNICAQEILICSSCTNEVLLPDGTHIDKVLVHDKKSLCMKSDMKITLVFDVLEEDSNEFADMDLRPYFSSRLINFSNMHPEVTFLILSCYHVSYVFSL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2382 115 PANTHER DNA REPLICATION FACTOR CDT1 1 100 IPR045173 GO:0003677|GO:0030174|GO:0071163
Amo20g2382 115 PANTHER EXPRESSED PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2382 Amo-Chr20 111725572 111726231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2382 4 98 Core DNA Replication Machinery Family AT2G31270 33.333 3.77e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2382 K10727 - gmx:102670055 117.087