Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2368 ATGGAGTGTATTGGTAGGACTTCCAATGGAGAGAGCAGCGTAGCTCGGTTCCCATTGTCACCATCGAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGCGGTGGTGGTGCAGATGGCGCGATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTATAGTGTTCCAGAGGTGAGGCCTGGAATTCGGTGCCCAACTGGGGAGGCAAGGATCACACCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACGGTTGGACCAATCTACAATTCTAATAGTAATCCTGCTGCTTCTCTTTCAAGCGCTTATAGGAACAGTTTGAGGGTTGCTAAGGATAAAAACATTCAGTATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGATATCCTTATGATGAGGCTGCCACGGTAGCGATTTCTGTCGTCAGGGAGTTTCGAAATGAGTTTAAGGAGATCCACTTTGTTCTGTTCTTGCAAGATATTTATCAAGTCTGGGTAAATAAAGCAAATGATCTGATGAAAAATTAG 600 0.4417 MECIGRTSNGESSVARFPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYRNSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNEFKEIHFVLFLQDIYQVWVNKANDLMKN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2368 199 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 14 198 - -
Amo20g2368 199 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 14 198 - -
Amo20g2368 199 SUPERFAMILY Macro domain-like 17 192 IPR043472 -
Amo20g2368 199 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 199 IPR043472 -
Amo20g2368 199 SMART YBR022w_8 24 162 IPR002589 -
Amo20g2368 199 Pfam Macro domain 45 162 IPR002589 -
Amo20g2368 199 CDD Macro_OAADPr_deacetylase 25 194 - -
Amo20g2368 199 ProSiteProfiles Macro domain profile. 12 197 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2368 Amo-Chr20 110676154 110677965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2368 30 135 C2H2 Transcription Factor Family AT5G01310 33.613 2.16e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2368 K23518 - gmx:100811169 318.931