Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2363 ATGACTTTCAAGCGCAGGAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTAAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGTCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGAGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTACTGTGTTTCGTGTGCTATTCACTCTCATGTTGTGAGGGTGCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAACGCTTTGCTAGACGCAGGGATGATGCACCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTGCTGGAGTTGGAGCTGCTCCACGTGCTTGA 390 0.5179 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGVGAAPRA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2363 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo20g2363 129 MobiDBLite consensus disorder prediction 86 129 - -
Amo20g2363 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo20g2363 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Amo20g2363 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 - -
Amo20g2363 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo20g2363 129 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2363 Amo-Chr20 110454258 110455603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2363 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 6.18e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2363 K02976 - gmx:100305706 196.823