Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2355 ATGGCATCTTCCTCCATCACTATTGGTGTTGCGGTTGCCCTCACCGTGCGTCCATTGCTGTTGTGGAAAGTGACATTATGGCCCTCCTCTCACACCTCCTCCATACACCTCTTTCCATTAATTTCTAAGCTCCTGAGTGGAGCAGTAGCAGCAATGATGATAGCTTTTCCTATGAGGATGAAGATTCTCATCAAGAGTGCTGAGTTTGACGAGGAGGTTCATGCCTATAAAGCTTACGGAAAGTATGCGAGAGATATGGGTTTTACTATCCGTAAAAGAGACCTGTCAAGAGATGAGGATGGAAATTTGAATAGAAGGTACTATGTTTTCAATCGCCAAGGGACAAGGGATCCAAAACACTATCGTCTAGTCGACGGAAAGAGGAATTATAAACCAGAGACTAGAACTGGTTACAAGGCACGTTGTTCTGTTTATTTGGATAAGTTGTCAATGAAATGGAGAGTCAAGACACTAGAAGAAGAGCACAACCATCCAATGATCCCAGAATAA 510 0.4314 MASSSITIGVAVALTVRPLLLWKVTLWPSSHTSSIHLFPLISKLLSGAVAAMMIAFPMRMKILIKSAEFDEEVHAYKAYGKYARDMGFTIRKRDLSRDEDGNLNRRYYVFNRQGTRDPKHYRLVDGKRNYKPETRTGYKARCSVYLDKLSMKWRVKTLEEEHNHPMIPE* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2355 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 67 166 - -
Amo20g2355 169 Pfam FAR1 DNA-binding domain 79 167 IPR004330 -
Amo20g2355 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2355 Amo-Chr20 110006849 110007904 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g2355 FAR1 3.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2355 - - ahf:112785563 238.81