Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2332 ATGGCAAGTGAAACGGTAATGGTTGATGAAATCTCCTATCCTTCCACGATCACTACTACCAAGCCCCTGTCTCTTCTTGGTCATGGAATCAAGGACATGGAGATCCATTTCCTCCAAGTGAAGTTCTATACAATCGGGGTCTATTTGGACCCTGAAATAGTGAACCACTTGACACAGTGGAAGGGTACACCCCCAAAGGAGCTTGAAGAGAAAGAAGAATTCTTTGATGGAGTGATTGCAGCTCCAGTGGAGAAGGTGATTAGGCTTGTGGTGATCAAAGAGATCAAGGGAGCACAGTATGGGGTTCAGATTGAGACTGCTGTGAGGGACCGTTTGGCTGCTGATGACAAATACGAGGATGAAGAAGAAGCTGAATTGGAAAAGATTGTTGAGTTCTTCCAATCTAAGTACTTCAAGAAGAATTCAGTCATCACATATCATTTCCCAGCGAACTCTCCAACTGCGGAGATTGTGGTGTCTTTGGAGGGGAAGGAAGATTCAAAGTTTGTGGTAGAGAATGCCAATGTGGTGGAGACCATCAAAAAATGGTACCTTGGTGGCTCAAGTGCTATCTCACCCTCAACCATTTCATCTTTGGCTACCACCTTCTCTCAGGAATTGTCCAAGTGA 630 0.4492 MASETVMVDEISYPSTITTTKPLSLLGHGIKDMEIHFLQVKFYTIGVYLDPEIVNHLTQWKGTPPKELEEKEEFFDGVIAAPVEKVIRLVVIKEIKGAQYGVQIETAVRDRLAADDKYEDEEEAELEKIVEFFQSKYFKKNSVITYHFPANSPTAEIVVSLEGKEDSKFVVENANVVETIKKWYLGGSSAISPSTISSLATTFSQELSK* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2332 209 PANTHER CHALCONE--FLAVONONE ISOMERASE 3-RELATED 1 209 IPR044191 -
Amo20g2332 209 Gene3D - 53 205 IPR016089 -
Amo20g2332 209 SUPERFAMILY Chalcone isomerase 5 208 IPR036298 GO:0016872
Amo20g2332 209 Gene3D - 13 184 IPR016088 -
Amo20g2332 209 Pfam Chalcone-flavanone isomerase 8 205 IPR016087 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2332 Amo-Chr20 108798265 108799654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2332 K01859 - gmx:778027 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2038 10 73501903 73504152 Amo20g2332 20 108798265 108799654 hybridization