Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2320 ATGGCGGTGGATGCATGTCGTGAACAAACCTCTTCATGTTTGGAGAGAATCAAGAAGAGAAAAAGGGAAGAAAACAAGAAACCGTCGTTTTCATGGGGATGTTCAACTGAGCTAATGATGTATGACGATCCATGGAAGCTGAAGAAGGTGCTGAACAGCAGCGACGTGGGGAGCTTGAGTAGGCTGTTGCTTCCGAAGGAGATGGCGGAGCCGCTGGTGGCAGCGGTGTTGGGGTACGACGAGAACCAGAAAGAAGGAATGGAGGTCGAGATATGGGACGTTGACACACAGTCAATGCACAGTCTTGTGTTCAAGAGATGGGGTTCTTCTAGAAGCTATGTCTTCATGGCCAATTGGATTAAAGACTTTGTCAAAAGAAGGTCTCTCAAGTCCGGCCATGAGGTTGGTTTCCACTGGGATCCTTATGCCAACCGCTTTGATTTCTCTGTTCTCAAGGCTGCTACAGAGGAGGATTTCTCAAACTGA 486 0.4815 MAVDACREQTSSCLERIKKRKREENKKPSFSWGCSTELMMYDDPWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAAVLGYDENQKEGMEVEIWDVDTQSMHSLVFKRWGSSRSYVFMANWIKDFVKRRSLKSGHEVGFHWDPYANRFDFSVLKAATEEDFSN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2320 161 CDD B3_DNA 45 152 IPR003340 GO:0003677
Amo20g2320 161 Gene3D - 44 157 IPR015300 -
Amo20g2320 161 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 153 - -
Amo20g2320 161 SUPERFAMILY DNA-binding pseudobarrel domain 43 148 IPR015300 -
Amo20g2320 161 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2320 Amo-Chr20 107803183 107803668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2320 43 158 B3 DNA Binding Superfamily AT3G26790 30.833 1.54e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2320 - - adu:107466113 307.375