Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2286 ATGGAAGGTGGGAGGAGGATTACGGTGAGTCCAAGACCATGCTGTGGGCGGAGAATCGTCGCAAAGAAGAGGCCGCGTCGTGGTGGCACGGTGGATGGGTTCGTAAACAGCGTTAAGAAGCTTCAGAGACGTGAAATCAGCTCCAAGCGTGATCGCGCTTTCAGCATGAGCGATGCTCAGGAGAGGTTTCGGAATATCCGCTTGCAGGAAGAATATGATACACATGACCCAAAAGGTCCTTCGTCTGTGGTATTGCCCTTTCTAAGGAGAAGATCCAAGATTATTGAGATAGTAGCAGCACGGGATATTGTTTTTGCTCTTGCACAGTCTGGTGTTTGTGCAGCATTTAGCCGAGAGACCAATCAAAGGATATGTTTCTTGAATGTCAGCCCTGACGAAGTTATAAGAAGTCTGTTCTACAACAAAAACAATGACTCGCTTATCACAGTATCTGTCTATGCATCCGACAGTTACAGTTCTTTGAAATGCAGAAGCACAAGGATAGAATACATTAGGAGGGGTAAGCCAGATGCTGGATTTGCTCTTTTTGAATCTGAGTCTTTGAAGTGGCCAGGTTTTGTTGAATTTGATGATGTAAATGGGAAGGTACTCACATACTCTGCACAAGATAGCATATACAAGGTATTTGACCTTAAAAACTATACAATGTTGTACTCCATTTCTGATAAAAATGTCCAAGAGATTAAGATCAGTCCGGGGATCATGTTGTTGATTTTTGCTAAAACAAGTAGCCATGTCCCGCTGAAAATTCTCTCAATAGAAGATGGTACTGTCTTGAAATCATTCAACCATCTCCTTTGTCGGAATAAGAAGGTGGATTTTATTGAGCAGTTCAATGAAAAGCTACTTGTCAAGCAAGAAAATGAGAACCTTCAGATTCTTGATGTGAGGACTTTCGATCTAACAGAAGTTAGCAGAAGTGAATTTATGACACCATCTGCCTTTATCTTTCTCTACGAGAATCAACTATTCTTGACATTTCGAAATAGGACTGTGGCTGTGTGGAACTTCCGTGGTGAGCTTGTTACTTCTTTCGAGGATCACCTCTTGTGGCATCCTGACTGCAATACAAACAATATATATATAACGAGTGATCAGGATCTCATCATATCCTACTGCAAAGCTGATTCTGAAGATTCATTGACCGAAGGAAATGCAGGCTCCATCAATGTTAGCAACATCTTAACTGGCAAGTGCCTTGCCAAAATAAGAGCAAGCAATAGCTTCCCAATTGAGAACGAATGTAGTTGCGGTGATGATTGTTCGGGTAGCCGTTGTAACTCAAAGAAGCGAAAGCATTCCTCCAAAATTAGGAGCACAGTTGCAGAGGCCTTGGAAGATATTACTGCCCTCTTCTACGATGAAGAGCGCAATGAGATCTACACGGGCAATAGGCATGGTCTAGTTCATGTCTGGTCTAACTGA 1446 0.4253 MEGGRRITVSPRPCCGRRIVAKKRPRRGGTVDGFVNSVKKLQRREISSKRDRAFSMSDAQERFRNIRLQEEYDTHDPKGPSSVVLPFLRRRSKIIEIVAARDIVFALAQSGVCAAFSRETNQRICFLNVSPDEVIRSLFYNKNNDSLITVSVYASDSYSSLKCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFAKTSSHVPLKILSIEDGTVLKSFNHLLCRNKKVDFIEQFNEKLLVKQENENLQILDVRTFDLTEVSRSEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSEDSLTEGNAGSINVSNILTGKCLAKIRASNSFPIENECSCGDDCSGSRCNSKKRKHSSKIRSTVAEALEDITALFYDEERNEIYTGNRHGLVHVWSN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2286 481 SUPERFAMILY Tricorn protease domain 2 112 480 - -
Amo20g2286 481 Gene3D - 193 481 IPR015943 GO:0005515
Amo20g2286 481 PANTHER - 4 481 - -
Amo20g2286 481 PANTHER OS05G0482600 PROTEIN 4 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2286 Amo-Chr20 106618180 106621972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2286 - - gmx:100819178 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2286 20 106618180 106621972 Amo20g2286 20 106618180 106621972 ECH
Amo10g3475 10 100579650 100583285 Amo20g2286 20 106618180 106621972 hybridization