Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2284 ATGGAGGAGGTGCTTGTTGCAATAATGAAGATCAGTTTTCCAGTTGGTATTATTCTTATTATTGTTGGGGGCATATCAATAATATTGATGTGTGTGTATGGTGAAGAGTGGAGCAAGTCCCAAAGGATTAGGAGGAAGTTAAGAATGCAAGGTGTAAAGGGGCCTCCACCTTCTTCATTTCTACAAGGAAATCTTCCTGATATCCATAGAATCAATAAATCTGCTCATCAACAAGCCAAATCTGTTCACACAAATAGTCATGATGACGATCATCCTCATCAGGAACGTGACTTCACTGCTTCCCTCTTCCCGTATTTTGAACACTGGAGAAAACAATACGGGCTTGTGTACACTTATTCTACAGGGATGAAACAACACTTATATGTTAACCAACCGGAGCTAGTGACAGAAATGAACAAGATTATGACTCTGGAGTTGGGTAAGCCTACTCACATAACAAAGAACCTTGCACCCCTTCTTGGCAATGGCATTTTAAGAGCCAATGGCCTTAGCTGGGCACATCAGAGAAAACTTGTTGCTGCTGAGTTCTTCATCGATAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCAGCGCAACCGTTACTAACAAAGTGGGAGAAACTTATTGAGGAAGAAGAAGCCATTGCTGAAGTTGAGGTTGATGGAGATTTGAGAAGCTTAGCAGCTGATGTTATTTCAAGGGTTTGTTTTGGTCATTCTTATTCCAAGGGGAAGCAAGTTTTTTCTAAACTTAGATTTATGCAGAAGACTATGTCCAAGCATGGAACCTTCCTTTTTGGCATCAAAGGTTTCTGGGACAAATTAAATTTCGGGAGAAAGAAGGAAAACAAGGTTAGCATGAAGGAGATGGAGACAGAGATAGAATCATTAATTTGGGAATTAGTGGAGGAACGCAAACGAGAATGCTCGGAGAAATCAAATTTGGAAAAAGATTTGATGCAGTTACTATTAGAAGCAGCAGCAATTGATGAAGGTTTACCCAAGAACTTTGGGAAGCAATTCATTGTGGATAATTGCAAGAACATATATTTTGCTGGCCATGAAACCATTGCTATCACGGCTTCTTGGTGTTTGATGCTTCTTGCTAAGTACCCGGACTGGCAAACTCGTATTCGGGATGAGGTCGTTGAACTCTTTCCCAGTGGCATACCAGACGCAGATTCTCTCCCTCTGTTGAAAACGTTGAATATGGTGATTCAAGAAGTGCTACGTTTGTATCCACCGGCAGCCTTTGTTTCAAGGGAGGCATATGAAGATATTCAAATTGGAAACCTTAATGTCCCTAAAGGAGTTTGTTTATGGACCCTGATTCCAACAATGAATAGAGATCCTGAAAACTGGGGACCAGATGCAAATGAATTTAAACCAGAAAGGTTCAGTGAGGGTCTCTCTAAAGCTTGCAAGTATCCACAAGCATATGTACCATTTGGATTGGGTCCTCGATTGTGTCTAGGCAAAAATTTTGCAATAGTTCAGTTAAAGGTTGTGTTGGCACTCATCATCTCCAAGTTTAGCTTCACTTTGTCTCCAAGTTATAAGCATTCTCCCAAATATAGGATGATTATAGAACCAGGATATGGTGTGCATATCCTTATTCGAAAGATCTAA 1632 0.405 MEEVLVAIMKISFPVGIILIIVGGISIILMCVYGEEWSKSQRIRRKLRMQGVKGPPPSSFLQGNLPDIHRINKSAHQQAKSVHTNSHDDDHPHQERDFTASLFPYFEHWRKQYGLVYTYSTGMKQHLYVNQPELVTEMNKIMTLELGKPTHITKNLAPLLGNGILRANGLSWAHQRKLVAAEFFIDKVKGMVGLMIESAQPLLTKWEKLIEEEEAIAEVEVDGDLRSLAADVISRVCFGHSYSKGKQVFSKLRFMQKTMSKHGTFLFGIKGFWDKLNFGRKKENKVSMKEMETEIESLIWELVEERKRECSEKSNLEKDLMQLLLEAAAIDEGLPKNFGKQFIVDNCKNIYFAGHETIAITASWCLMLLAKYPDWQTRIRDEVVELFPSGIPDADSLPLLKTLNMVIQEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTMNRDPENWGPDANEFKPERFSEGLSKACKYPQAYVPFGLGPRLCLGKNFAIVQLKVVLALIISKFSFTLSPSYKHSPKYRMIIEPGYGVHILIRKI* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2284 543 PANTHER CYTOCHROME P450 714A1-RELATED 18 538 - -
Amo20g2284 543 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 538 - -
Amo20g2284 543 MobiDBLite consensus disorder prediction 75 94 - -
Amo20g2284 543 SUPERFAMILY Cytochrome P450 98 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 Pfam Cytochrome P450 100 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 481 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 491 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 484 493 IPR017972 GO:0005506|GO:0016705
Amo20g2284 543 Gene3D Cytochrome P450 37 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 Coils Coil 288 308 - -
Amo20g2284 543 PRINTS P450 superfamily signature 491 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS P450 superfamily signature 482 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g2284 543 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2284 Amo-Chr20 106348510 106353678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2284 134 540 Cytochrome P450 AT5G24900 56.204 2.83e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2284 K20661 - gmx:100815776 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g3475 10 100579650 100583285 Amo20g2284 20 106348510 106353678 hybridization