Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2283 ATGGGAGTGGCAGCAAACGCACCGTTAACAATGATGATAGAGTGTTCCACCTCCAGAAATTCCACCATGGAACTCAAATGGCTCAGAACTACAACAACAATAAAATCAACCACCAACAAGAACCTTCTCTTTAGACCACCCATCTTCCCAATTTACATCTCTACTGATCCCCACCACGTCGATCCTCTCCGCCTCCAGGATCAGCCCCTCCTTGTCGACACTCGCAAGCTCCGCATTGCTCTCTCTCACAGCGCCGTCGTTGTCTCCGTCTTCTGCAAGTCTCATCACGTTCTTGCCGCTGCTGATAGTGGTGACGATGAAAGTTTTGGGATGGACGATTTGGTTGAGTGTGTGACGCCGGTGACTCCTTCCGACGGTGAATTGGTGGGGTTTGGGCGTGCCGTTTCCGACTGCGGCCTCACTGCTTCAATATACGATGTCATGGTTATTCCATCCCTGAGGAGAATGGGAATTGGAAGGGTGATACTTAAAAGAATTGTGAGAATGCTTATAAATAGAGAGGTTTATGACATAGCAGCCCTTTGCACCGAGAACGAGAGGTTGTTTTTTAAGGCATGTGGATTTGGGGGTGACATTTTAGGCTCTACAACCATGATGTACACCAGAACTGCTTCATCTACTGCCGAGGAAGAACAGACCTTTACACGTGCGGGTAGAAAGCTATTGTTGATTCCCCCTCATAAGTCCTAA 711 0.4824 MGVAANAPLTMMIECSTSRNSTMELKWLRTTTTIKSTTNKNLLFRPPIFPIYISTDPHHVDPLRLQDQPLLVDTRKLRIALSHSAVVVSVFCKSHHVLAAADSGDDESFGMDDLVECVTPVTPSDGELVGFGRAVSDCGLTASIYDVMVIPSLRRMGIGRVILKRIVRMLINREVYDIAALCTENERLFFKACGFGGDILGSTTMMYTRTASSTAEEEQTFTRAGRKLLLIPPHKS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2283 236 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 72 222 IPR000182 GO:0016407
Amo20g2283 236 Gene3D - 49 198 - -
Amo20g2283 236 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 17 233 - -
Amo20g2283 236 Pfam Acetyltransferase (GNAT) family 117 195 IPR000182 GO:0016407
Amo20g2283 236 CDD NAT_SF 125 175 - -
Amo20g2283 236 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 124 195 IPR016181 -
Amo20g2283 236 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 17 233 IPR039143 GO:0004343|GO:0006048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2283 Amo-Chr20 106344876 106346328 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo20g2283 Acetyltransf_1 2.2e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2283 - - lang:109338220 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2283 20 106344876 106346328 Amo20g2283 20 106344876 106346328 ECH