Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo20g2259 | TCTCAAAATAGAGAAATTCCAATAGCAGAGGCATTGAGACATCAAATTGAAGTCCAAAAGAGACTGGAAGAACAGCTAGATGCTCAAGGGAAGTATTTGCATGCTGTGTTAGAGAAAGCCCAGAGGACACTTTCCATGGAAGGTTCAGGCAATAATCTAGAAGCATCAAGAGCTCAATTTATCGAATTCAATTCTGCCTTGTCCAATTTCATGAAAAACATGAACAATAAAGATAGCAAACAAAGCATATCATACGTGAATGATTTTTATAGTAAAGTCCATGGTTCAGGTTTCCATAATTACCATGAAGTAATAAGAAGAGAAGAAAATATTTTTGACTTAAACAGCAAAAGTAGCTATGATCTTGTAGCTGCAAGTGGTGGTGGATCTGAAATTGAATCCAATAGGCTATGA | 414 | 0.3599 | SQNREIPIAEALRHQIEVQKRLEEQLDAQGKYLHAVLEKAQRTLSMEGSGNNLEASRAQFIEFNSALSNFMKNMNNKDSKQSISYVNDFYSKVHGSGFHNYHEVIRREENIFDLNSKSSYDLVAASGGGSEIESNRL* | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo20g2259 | 137 | Coils | Coil | 9 | 29 | - | - | |
| Amo20g2259 | 137 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 6 | 108 | IPR044848 | GO:0003700 | |
| Amo20g2259 | 137 | Pfam | MYB-CC type transfactor, LHEQLE motif | 7 | 42 | IPR025756 | - | |
| Amo20g2259 | 137 | PANTHER | OS02G0700300 PROTEIN | 6 | 108 | - | - | |
| Amo20g2259 | 137 | Gene3D | Longin domain | 17 | 119 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo20g2259 | Amo-Chr20 | 105265482 | 105266121 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo20g2259 | 2 | 135 | G2-like Transcription Factor Family | AT5G45580 | 35.220 | 7.21e-19 | 77.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo20g2259 | - | - | adu:107487134 | 207.994 |