Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2212 ATGAAGTTGAACAAGATACAGTGTACTTTGAAGAACGTCATTAATCAATTCCGAGAAATTCTCAAAGAAGGAGAGCTGTATTCTATATCTCGATTCACGGTAGTTCCAAATATTGGTGCAGCAAAAGTTATAAAGCATCGATATAAGTTACTTTTTCGGTTTGACACGGAGGTTATTCCAATTTCCGATGTTGAGTTTCCAGAGGGTTCATATTCATTAGAGACTGTTGAAAGTGTTGTTCAGATGGGACAAGATTCAGTCTACTTGATCGATGTCATGGGTTTCCTGATAAGTGTTCGTGACTATTCTGATGTTGAACTTGACGATGGAAAAAAGTTTAAATTAGTTCTCATCCAGTTGTATTCAAATGGCTCTTATCTCACCTGTAATTTATTTGGAGATTTTTTAACAAAGATGCGGTTGGCTCTTATGAATGCTGTCTCGCAACCGCCAATCATTTTACTCCAATCTGTCAAGGTCAAGATTTATGAAGGGAAGGTTGTAGTTCAGAATGTAATAGATTGTACCAAAATCATGATCAATCCTGATATTCCAGAGGCTATATGTTTTATTACTAGATTGGATCCTTCGGAGTCATATTTCATTGACTCTATCACCCTTGGTAATGGATTTATTGTTGCTGATGATGGTTTCTTCAATGTTGTTGCTAAGATTAAAAGTATATGCAACAATTTTGATTGGTGGTCCTACTCATGTGTCTGTGGTTATCCTTTGGAGCTTTTTAGAAGTCATTTCAGTTGTTCCGAATGTGGAAGGAAAATAAAGAATGCTGTGAAGAAGTACAAGGTTTTAGTAGATGTTGAGGATGCTACTYGAAGTGCTAGATTTGTTTTGTATGACCGTCCTGCAACGCTCTTATTCAGGTAA 888 0.3649 MKLNKIQCTLKNVINQFREILKEGELYSISRFTVVPNIGAAKVIKHRYKLLFRFDTEVIPISDVEFPEGSYSLETVESVVQMGQDSVYLIDVMGFLISVRDYSDVELDDGKKFKLVLIQLYSNGSYLTCNLFGDFLTKMRLALMNAVSQPPIILLQSVKVKIYEGKVVVQNVIDCTKIMINPDIPEAICFITRLDPSESYFIDSITLGNGFIVADDGFFNVVAKIKSICNNFDWWSYSCVCGYPLELFRSHFSCSECGRKIKNAVKKYKVLVDVEDATXSARFVLYDRPATLLFR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2212 295 Gene3D - 202 295 IPR012340 -
Amo20g2212 295 SUPERFAMILY Nucleic acid-binding proteins 215 294 IPR012340 -
Amo20g2212 295 Pfam Domain of unknown function DUF223 6 80 IPR003871 -
Amo20g2212 295 Gene3D - 65 200 IPR012340 -
Amo20g2212 295 Gene3D - 2 64 IPR012340 -
Amo20g2212 295 CDD RPA1_DBD_B_like 91 195 - -
Amo20g2212 295 SUPERFAMILY Nucleic acid-binding proteins 72 195 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2212 Amo-Chr20 102430144 102432128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2212 5 278 Core DNA Replication Machinery Family AT5G08020 22.364 4.86e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2212 - - aip:107620782 420.624