Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2203 ATGGGTACAATTGATCCAAATCTTGTTTTCGCTGCAAGGCCTGGTTATGGCCACCTTGGAACAAAATGTGTTGTCAAAGCTAACCACTTCCTTGCAGATATTTCAGCATCTGACCTCGGCCATTACACTGTTAAGATAATACCTGAAGTGAGGTGTCGTAAAACAAGCAAAGCTATAATAGCTGAGTTGGTGAGGGTTCATAAGAACACTGAGTTGGGGATGAGGCTTCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCTGCCATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGATTGAAGATGATGAGAGTATTGGTACTACCAGTGGAAAACAAGTGGACACACCACAAGAAGCACTTATTGTTATTGATATTGTTCTGAGGGAGCTTGCAGCACAGAGTTACGTGTCCGATTGGGAGGTTTCTGTATTACAACTCAGTTGTGCCAAGGCTGATTCTACTCCATCGAAAAAGCCAAAGCCAAAGCTATCACCAGCACAAGCTCTTGGCACCCCAGCCAAGAAAAAGTCTCTAGCTATGATGTCTCCTTCAAGCAGCATCAACAGGGTCTTTTTCCTTATGAATTATGGAGAGTAA 609 0.4253 MGTIDPNLVFAARPGYGHLGTKCVVKANHFLADISASDLGHYTVKIIPEVRCRKTSKAIIAELVRVHKNTELGMRLPVYDGGRNLYTAAMLPFTYKEFTILLIEDDESIGTTSGKQVDTPQEALIVIDIVLRELAAQSYVSDWEVSVLQLSCAKADSTPSKKPKPKLSPAQALGTPAKKKSLAMMSPSSSINRVFFLMNYGE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2203 202 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 7 109 - -
Amo20g2203 202 MobiDBLite consensus disorder prediction 155 179 - -
Amo20g2203 202 PANTHER PROTEIN ARGONAUTE 10 7 109 - -
Amo20g2203 202 Pfam N-terminal domain of argonaute 21 115 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2203 Amo-Chr20 101188731 101190247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2203 1 139 Eukaryotic Initiation Factors Gene Family AT5G43810 45.455 1.68e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2203 K11593 - ahf:112784635 332.798