Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2166 ATGATGTTGCAAATTCAATGGAAATTTTTCTTGTTGATGAAGATTGTTGTTCCAAACCAAGACAATTATAGGGTAGCAGAACATGAGTTTAAGTTGGTTTTCCTTAACCGTACAACTGTTATTCCTGTCCCTGATGATGCTATCCCCAAGACATGTTTCAGTTTCTATCCATTTGATGAGCTGTTGAAAATGACTACAGATTATGTTTACTTAGTTGGTAGTTTGTTGCCTTTTTTTATTGATGTTATTGGTTTGCTAACTTCTGTTGGTGAAGAGAAAGAGTATGTGAAAGATGGCAAAGTGATGAAGATGATTGTTCTTGAGTTATCTTCAAAAGAGTTGGCAATACGCTGTGCTCTGTTTGGGGAGTACGTGGATGAAGTGCATCGTTTCTTAGGTTCTAGTTATATGGAGCAGCCAGTTGTTGTGATCCAGTTTGCCAAAGTTAAATTCTTTAGGGGTATTGGTATCCAAAATGTTATGCATGCTACTCGCCTGTTCTTTAATCCAGATTTGGCTGAAGTTGTTGATTTCAAAAACAGTATGGTTGATCAAGGTATCAATGGAACACAACCATTGTTTATTGCTAATGACGGCAAGGGTATTTCATTGGAAGATGATTTTATGTGGCTTACTAGGAGATGCACTATTAAGGAACTCCATGATAACAATGAGGAAGGGTCTTTTGTGGTTTTTGGTATTGTGAGATCTATTGTGGATGAGGGACCTTGGTGGTATTCAGCTTGTGTTTATGGGAAGATCAAAATAGCGGTTGAGAATGATAATGGACATGGTGTATTTGTCTTATTTGATTTTGAGGCTGCTTACTTACTGAAAAAATCATGTGCTGATCTGTTTGAAGAAGTTCAAAAGGATGCAAGTATTAGCCTCATATTAATATTAAATATTTAG 912 0.364 MMLQIQWKFFLLMKIVVPNQDNYRVAEHEFKLVFLNRTTVIPVPDDAIPKTCFSFYPFDELLKMTTDYVYLVGSLLPFFIDVIGLLTSVGEEKEYVKDGKVMKMIVLELSSKELAIRCALFGEYVDEVHRFLGSSYMEQPVVVIQFAKVKFFRGIGIQNVMHATRLFFNPDLAEVVDFKNSMVDQGINGTQPLFIANDGKGISLEDDFMWLTRRCTIKELHDNNEEGSFVVFGIVRSIVDEGPWWYSACVYGKIKIAVENDNGHGVFVLFDFEAAYLLKKSCADLFEEVQKDASISLILILNI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2166 303 PANTHER REPLICATION FACTOR A 1, RFA1 20 286 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo20g2166 303 SUPERFAMILY Nucleic acid-binding proteins 53 182 IPR012340 -
Amo20g2166 303 CDD RPA1_DBD_B_like 81 182 - -
Amo20g2166 303 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 286 - -
Amo20g2166 303 Gene3D - 47 190 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2166 Amo-Chr20 98587508 98591343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g2166 8 217 Core DNA Replication Machinery Family AT2G06510 25.941 5.81e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2166 - - aip:107647213 465.692